Mixta calida: C2E16_18965
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Entry
C2E16_18965 CDS
T05419
Name
(GenBank) DNA-binding transcriptional regulator SoxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcd03000
]
C2E16_18965
Transcription factors [BR:
pcd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C2E16_18965
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AUY26771
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All DBs
Position
3982947..3983375
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AA seq
142 aa
AA seq
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MMHKDIIHSLTDWIDRNLDKNLSIDEVAAKAGYSKWHLQRMFRAVTRQTLGSYIRERRLT
LAAEALTLTQRPVFDIAMQYGFDSQQTFSRVFRRQFSQTPTAYRHSMRRQNALRQRPAAF
PRGDAMSSFAQRTTGVCCPVSG
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgatgcataaagatattattcattctctgactgactggattgatcggaacttagataaa
aatctttccattgatgaagtcgcagccaaagctggctactccaagtggcatctgcagcgg
atgtttcgcgccgtcaccaggcagacgctgggcagctatatccgtgaacgtcggctgacg
ctggccgcggaagcgctgaccctgacgcagcgtccggtatttgatatcgccatgcagtac
ggctttgattcgcaacagactttttcccgcgttttccgccgccagttttcgcagacgccg
accgcctatcgtcacagcatgcgtcgccagaacgcgctgcgtcagcgtccggccgccttt
ccgcgcggcgatgcgatgagcagcttcgcccaacgcaccaccggcgtctgctgcccggtc
agcggttaa
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