Mixta calida: C2E16_19930
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Entry
C2E16_19930 CDS
T05419
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcd03016
]
C2E16_19930 (trmA)
Enzymes [BR:
pcd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
C2E16_19930 (trmA)
Transfer RNA biogenesis [BR:
pcd03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
C2E16_19930 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
DUF3164
Motif
Other DBs
NCBI-ProteinID:
AUY26926
LinkDB
All DBs
Position
4194144..4195244
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AA seq
366 aa
AA seq
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MTPEKLPVEHYETQLAEKVTRLQQLMAPFSAPEIEVFRSPVSHYRMRAEFRIWHDGDDLY
HIIFDQQTRQRIRVDQFPAASELINQMMPLMIAAIRNHAALRRKLFQIDYLSTMSNQIVI
SLLYHRKLDEAWQQAAEALRDALRAQGFDVQLIGRATKTKICLDRDYVDERLPVAGREMI
YRQIENSFTQPNAAMNIQMLEWALDVTKNAQGDLLELYCGNGNFSLALARNFRRVLATEI
AKPSVAAAQYNIAANQIDNVQIIRMAAEEFTQAMNGVRAFNRLEGIDLQSYQCETIFVDP
PRSGLDEETVKLVQGYPQILYISCNPQTLCDNLATLAQTHAVTRLALFDQFPYTHHMECG
VLLTRR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgaaaaactgcccgtcgaacattatgaaacccagctcgcggaaaaagtgacg
cgcctgcaacagctgatggcgcccttctccgcgccggaaatcgaggtgtttcgctcgccg
gtcagtcactatcgtatgcgcgcggaattccgcatctggcacgatggcgacgatctctac
cacatcattttcgatcagcagacgcgccagcgcatccgtgtcgatcaattccccgccgcc
agcgaattgatcaatcagatgatgccgctgatgatcgccgcgatccgcaatcacgcggcg
ttgcgacgcaagcttttccagattgattatctttcgacgatgagcaatcagatcgttatc
tccctgctttatcaccgcaagcttgatgaagcgtggcagcaggcggcggaagcgctgcgc
gatgccctgcgggcgcagggtttcgatgttcagctgattggccgcgccaccaaaacaaaa
atctgcctcgatcgggattacgtcgatgaacgcctgccggttgccgggcgagagatgatc
tatcgccagattgaaaacagctttacccagcctaacgcggcaatgaatattcagatgctg
gaatgggcgctggacgtaacgaagaacgcacagggcgatctgctggagctttactgcggc
aacggcaatttttcgctggcgctggcgcgtaatttccgccgcgtgttggcgacggagatc
gccaagccttcggtcgccgccgcgcaatacaacattgcggcaaaccagattgataacgtg
caaataattcgcatggcggcggaagagtttacgcaggcgatgaatggtgtacgcgcattt
aatcgcctggaggggattgatttacagagctatcagtgcgagaccatttttgtcgatccg
ccgcgcagcggcctcgatgaggagacggtaaaactggtgcagggttacccacagatcctc
tatatctcctgcaacccgcaaaccctgtgcgacaacctcgcgacgctggcgcagactcat
gctgtaacgcgtctggcgctgttcgatcagttcccgtatacccatcatatggagtgcggc
gttctgctgacgcgtcgctaa
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