Mixta calida: C2E16_20240
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Entry
C2E16_20240 CDS
T05419
Symbol
rfaQ
Name
(GenBank) putative lipopolysaccharide heptosyltransferase III
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
pcd
Mixta calida
Pathway
pcd00540
Lipopolysaccharide biosynthesis
pcd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C2E16_20240 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
C2E16_20240 (rfaQ)
Enzymes [BR:
pcd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
C2E16_20240 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
Core region
C2E16_20240 (rfaQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
GcpE
Motif
Other DBs
NCBI-ProteinID:
AUY26982
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All DBs
Position
4259676..4260752
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AA seq
358 aa
AA seq
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MASQIPASFTPRNILVIKLRHHGDMLLTTPVINALHQRYPGAAIDVLLYQETRPMLQAHP
AIRRLHLIDRKWKKQGVWRQLKHELALVNAIRDSHYDLVINLADQWRSALITKLTGAPER
IGFAYNKRDSHFWRACHNHLVSTANFSQLHTVEQNLLALSPLDVPMENAPVTMYYANEDW
LAAEQQLQKQGVTGPYIVIQPTSRWTFKCWDDDKVAALIDRLNQPGQHIVLTAAPDRKEL
AMIEHILSLCSNPQVATIAGQLSLTQLAALIDHARLFIGVDSAPMHMAAALQTPCVALFG
PTKLQQWRPWGARNRVIWAGDYGPLPTPDSIDTKTEQRYLSAIPVDDVAAAARSYLDA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcagatccctgcatcttttacaccacgcaatattctggtgatcaaactacgt
catcacggcgatatgttgttgaccacgccggttatcaatgcgctgcatcagcgctatccc
ggcgccgcgatcgatgtgttgctctatcaggaaacgcgtccgatgttacaggcgcatccc
gcgattcgtcggctgcatctgatcgatcggaaatggaaaaagcagggcgtctggcgtcag
ctaaagcatgagctggcgctggtgaacgccattcgggacagtcattacgacctggtgatt
aatctggccgatcagtggcgcagcgcgctgataactaaacttaccggcgcgccggagcgc
atcggtttcgcctataacaagcgcgacagccatttctggcgcgcctgccataatcacctg
gtttcaacggcgaattttagtcagctgcataccgtcgaacaaaatctgctggcgctctcg
ccgcttgatgtgccgatggagaatgcgcccgttacgatgtattacgcgaatgaagactgg
ctggccgccgaacaacagcttcagaagcaaggcgttaccggcccttatattgtgattcag
cccacctcgcgctggacatttaaatgctgggacgacgataaggtcgccgccttaatcgat
cggcttaatcagcccggccagcatatcgtgctaaccgccgccccggaccgtaaagagctg
gcgatgattgagcatattctttcgctctgtagtaacccgcaggttgccactattgccggg
cagctcagcctgacgcagctggcggcgcttatcgatcatgcgcggctgtttatcggcgtc
gactcggcgccgatgcatatggcagcggcgctgcaaacgccctgcgtggcgctgttcggc
ccgaccaaactacagcagtggcgtccgtggggcgcccgtaaccgggtcatttgggcaggc
gattacggcccgctgccgacgcccgattctatcgatacgaaaaccgagcagcgctattta
agcgccatcccggttgacgatgtggccgccgccgcgaggagttatctggatgcgtaa
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