Mixta calida: C2E16_20365
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Entry
C2E16_20365 CDS
T05419
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pcd
Mixta calida
Pathway
pcd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2E16_20365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcd03021
]
C2E16_20365
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_20365
Enzymes [BR:
pcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C2E16_20365
Transcription machinery [BR:
pcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C2E16_20365
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C2E16_20365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
AUY27006
LinkDB
All DBs
Position
4283718..4283993
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVNGKDPLVPEENDKPTVIALREIEEGLIT
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaaccgttcaggacgcagtagagaaaattggtaaccgttttgacctggtt
ctggtcgctgcacgtcgcgcacgtcagatgcaggtgaacggtaaagatccgctggtaccg
gaagagaacgacaaaccgaccgttatcgccctgcgtgagatcgaagaaggcctgatcacc
aatcagatcctcgatgtacgtgagcgtcaggaacagcaggagcaggaagccgccgaattg
caggccgtgaccgctatcgctgaaggccgtcgttaa
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