Mixta calida: C2E16_20460
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Entry
C2E16_20460 CDS
T05419
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcd
Mixta calida
Pathway
pcd03030
DNA replication
pcd03410
Base excision repair
pcd03420
Nucleotide excision repair
pcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2E16_20460
03410 Base excision repair
C2E16_20460
03420 Nucleotide excision repair
C2E16_20460
03440 Homologous recombination
C2E16_20460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcd03032
]
C2E16_20460
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_20460
Enzymes [BR:
pcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2E16_20460
DNA replication proteins [BR:
pcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C2E16_20460
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C2E16_20460
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2E16_20460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
HSP70
Motif
Other DBs
NCBI-ProteinID:
AUY27024
LinkDB
All DBs
Position
complement(4305543..4308332)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYKPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHNMVRAMGLPLLAVSGVEADDVIGT
LALQAEQQGRAVLISTGDKDMAQLVTPNITLINTMNNAILGPDEVKEKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGITTLYENLDKIADLSFRGAKTMAAKLEQNK
EVALLSYQLATIKTDVALDVDCEQLTVNEPDVETLLGLFRHYEFRRWLTDLEEGKWLQGR
KSNVGAQKKLAEEEPAPQPESVSVLSSDGYVTILDEATFDSWLKKLQQSELFAFDLETDS
LDTLTANIIGLSFAVAPGEAAYLPVAHDYLDAPDQLDRNAVLARLKPLLEDEKCLKVGQN
LKFDRSVLKNYDIELGGIKFDTMLESYMLNSVVGKHDMDSLASRWLNHKTVTFTEIAGKG
KNQLTFNQIALEQAAHYAAEDADVTLQLHLKMWPELEKEAGPKKVFEEIEMPLLAVISRI
ERNGVLIDQNILAKHSQELTTRLKELEEKAHELAGEPFNLSSTKQLQTILFEKQGIKPTK
KTPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPQMINPRTGRVHTSYQ
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPKGCRIVAADYSQIELRIMAHLSQD
KGLLAAFAEGQDIHRATAAEVFGVSVDKVTNEQRRSAKAINFGLIYGMSAFGLSRQLNIN
AGEAKIYMDRYFERYPGVLTYMETTRQQASEQGYVSTLDGRRLWLPDIKSANAIRRKAAE
RAAINAPMQGTAADIIKRAMIDVDAWLRQPDAPQVTMIMQVHDELVFEVREEDVKSASAK
IQQLMENSVKLDVPLRVDVGVGDNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatcgcagaaaaccctttgattctggtagatggatcttcctacctttatcgc
gcctatcacgcttttcctccgctgacgaacagcgctggcgagccgaccggcgcgatgtac
ggcgtcctcaatatgctgcgtagcttactgttacagtacaaacccagccatgtcgccgta
gtgtttgatgcaaaaggcaaaacgtttcgtgacgaactgtttgagcattacaaatcccac
cgtccgcccatgccggatgatctgcgggcgcaaattgagcctctgcataatatggtgcgc
gcgatggggctgccgttgctggcggtatcaggcgtagaagcggatgacgtgatcggcacg
ctggctctgcaggcggaacagcaggggcgcgcggtgctgatcagcaccggcgacaaagat
atggcccagctggttacgccgaacatcacgcttatcaataccatgaacaacgccatcctt
ggtccggacgaggttaaggaaaaatatggcatcccgcctgaactgattatcgacttcctc
gcgctgatgggcgatgcctccgataatattcccggcgtgcctggcgtgggcgagaaaacc
gcgcaggcgctgttacagggcttgggcggcattaccactctctatgaaaatctggataag
atcgccgatctcagcttccgtggcgcaaaaaccatggcggcgaagctggagcagaataaa
gaagtggcgctgctctcttatcagctggctaccattaaaaccgatgtggcgctggatgta
gactgcgagcagctgacggtcaatgagccggatgtcgagacgctgctgggtctgttccgt
cattatgaattccgccgctggctgaccgatctggaagagggcaaatggcttcagggacgc
aagagcaatgtcggcgcacagaaaaagctggcggaagaggagccagcgccgcagccagaa
agcgtcagcgtgctttcttctgacggctacgtcactatcctggatgaagcgactttcgac
agctggctaaagaaacttcagcagagcgagctgttcgctttcgatctggaaaccgattcg
ctggacactcttaccgccaacattatcggcctctcctttgccgtcgcgccgggcgaggcg
gcctatctgccggtggcgcatgattacctggatgcgcccgatcagctggatcgcaacgcc
gtgctggcgcggctcaagccgctgctggaagatgaaaaatgcctgaaagtgggtcagaac
ctcaagttcgaccgtagcgtgctgaaaaactacgatatcgagctgggcggcattaaattc
gacaccatgcttgaatcctatatgctgaacagcgtggtcggtaagcatgatatggacagc
ctggcgtcacgctggctgaaccataaaacggtcaccttcaccgaaatcgcgggcaaaggc
aaaaaccagctgacctttaaccagatcgcgctggagcaggcggcgcattacgctgcggaa
gatgcagacgtcacgctgcaattgcacctaaaaatgtggccggagctggagaaagaggct
ggcccgaaaaaggtgtttgaagagatcgaaatgccgctgctggcagtgatttcacgcatc
gaacgcaacggcgttttaatcgaccagaacattctggcgaagcattctcaggagctgacc
acgcgcctgaaagaacttgaagaaaaagcgcatgagctggcgggcgagccgtttaatctt
tcatcaactaaacagctgcaaactattctgtttgaaaagcaggggatcaagcccacgaaa
aaaacgccgggcggcgcgccttctaccagcgaagaagtgctggccgagctggcgctcgac
tatccgctgccgaaagtgattctggagcatcgcggcctgtccaagctcaaatcgacctat
accgataagctgccacagatgattaacccgcgtaccggccgggtgcacacctcttatcaa
caggcggtcacggcgacagggcgtctctcgtcgaccgatcctaacctgcaaaacatcccg
gtgcgtaatgaagaagggcgccgtatccgccaggcatttatcgcaccgaaaggttgccgc
atcgtcgcggcggattactcgcagatcgagctgcgcattatggcgcatttgtcgcaggat
aaagggctgcttgccgcttttgccgaaggtcaggatatccaccgcgcgacggcggcggaa
gttttcggcgtcagcgttgataaggtaaccaacgaacagcgccgcagcgcgaaagcgatt
aacttcggtctgatctatggtatgagcgcatttggtctgtcgcgtcagctgaatatcaac
gcgggcgaagcgaaaatctatatggatcgctattttgaacgctatccgggcgtgctgacc
tatatggaaaccacgcgtcagcaggcgtccgagcaaggttatgtttctacgttggatggc
cgtcgcctgtggctgcctgatatcaaatccgctaacgccattcgacgtaaggcggcggag
cgcgcggcaatcaacgcgccgatgcagggaaccgcggcggacattatcaagcgtgcaatg
attgacgtcgatgcctggctgcgccagccggacgcgccgcaggtcacaatgattatgcag
gttcacgatgaactggtatttgaagtgcgggaagaagacgttaaatccgccagcgcgaaa
atccagcagctgatggaaaacagcgtgaagctggatgtaccgctgcgggtagatgtcggc
gtaggcgataactgggatcaggcgcactga
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