KEGG   Pediococcus claussenii: PECL_1021
Entry
PECL_1021         CDS       T01713                                 
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
pce  Pediococcus claussenii
Brite
KEGG Orthology (KO) [BR:pce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pce03400]
    PECL_1021
Enzymes [BR:pce01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     PECL_1021
DNA repair and recombination proteins [BR:pce03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PECL_1021
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEDDh_C Helicase_C Rv2179c-like AAA_22 Nterm_IS4
Other DBs
NCBI-ProteinID: AEV95289
UniProt: G8PDF4
LinkDB
Position
complement(1023598..1026378)
AA seq 926 aa
MLNKRYAVVDLETTGNDMNGENRIIQIGCTFIENGRIVDEYSSDVNPERSVPAMITRLTG
ITQERVDTAPKFSDIAGKVFAMLQGTNFVAHNVNFDFPFLNDEFMRSGYPSLDTPAIDTV
TLSQVIFAKAPGYRLRDLTHYLGIEHLNPHSANSDSRATAYVLIHLLKKIQGLPLVTLKE
LAKLGEALPRDTFEVVKDALNINKERKKDLPSNLVVVNGIALRRPDGYQTAPLDKIAEFP
MTKKEKQHLFGDYLAIRKTQSSLMNYVFRNLRKENIKNLVIEAPTGMGKTLGYLLPLAYL
SVIENRQMVVSVPTTILQEQVLQEGNRVLNRILPTPINLEIVKSNHNYLDLNLLEKQLKN
GQLSKESKLLAMKVMVWLLETNTGDLDEINQHVGFSNFIEEVRYRGGAIQGETNPFFEFD
FYRRNLARRQTANVLITNHNFLIKNIDEFVKKNNYNSPFLVVDEAQHFVSDLKQFNEIII
DLTTLLNKVTKINENIKDWLFKTQRNGQATRLSQNDLQSTQNVLLRLTNDIEDFQAILFA
KFVKKFTHTQLTGQPFELAIDTSFLLRKNAEWKRIYDDLANGMVAIQKLIQQSNEDYLLS
EDRDLLLNIQTDAEIFEIAYEMMKKIIQKKPKGEVFSVLVGANHDQRSIRVAREIAEATA
FYNSKVEKTFAKTLLIGGTLFAGHNRKYFLQNFDFNSDSTKIRTFNSEIDYKNRLKFEVL
DSDFSISQEKSYQNYEQFLAESIYKLTKGIDKQTLVLFNSLETLAHVYGLLRMTDLNEDR
KVLAQGINGSRAKIIREFNDEENAIVLGAASFWEGVDFPGDQLEYLIITRLPFRSPEDKL
SQLAKVTSKNVFQSFLLPDALLTFKQGIGRVIRKSDDRGAVVVLDRRIIDRKYGKQFISQ
LPNGVENKINDVEKIRNDLKNFYRSK
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgttaaataaaagatatgctgttgttgacttagaaacgactggcaatgacatgaatggc
gaaaatcgaataatacaaattgggtgtacatttattgagaatgggcgaattgttgatgaa
tatagtagtgatgtgaatcccgagaggtccgttcctgctatgattacaaggctaacgggg
attactcaagaaagggttgatactgcgcctaaattttctgatattgctggaaaagttttt
gcaatgttacaaggaacaaattttgtagcacataatgtgaattttgactttccttttttg
aatgatgaatttatgaggagtggatacccttcacttgatacaccagcaattgatacggtt
actctaagtcaggttatttttgcaaaggcacctgggtatcgattaagagatttaacccat
tatctaggcatagagcatttaaacccgcattctgcaaatagtgactctagggcaacagcc
tatgtcttaatccacctgcttaagaagatacaggggttgccgttagttactttgaaagag
ttggctaaactgggggaagctcttcccagggatacttttgaagtggttaaagacgcatta
aatataaacaaagaacgaaaaaaagatttaccttcaaatttggtcgtcgtaaatgggatt
gcattacgcagacctgatggttatcaaacggcaccgcttgataagatcgcggaatttcca
atgacgaagaaggaaaagcaacatttgtttggagattacctggctattagaaaaacacaa
tcatcactgatgaactatgtgtttcgtaatttaagaaaagaaaatattaaaaacttggtg
attgaggcgccgactggaatggggaaaacattaggatatttattaccgttagcttatctt
agtgtgattgaaaatagacaaatggtcgttagtgttccgactaccatccttcaggaacaa
gttttacaggagggaaatagggtattaaatcgtattttaccaactcccataaacttagaa
atagttaagtctaatcacaattatttggatcttaatctgttagaaaaacaattgaagaat
ggacaactaagtaaggaatcgaaattacttgcaatgaaagtgatggtctggttacttgaa
acaaatactggtgatttggatgaaatcaatcagcatgttggtttttctaactttattgaa
gaagttcgttatcgtggaggggcaatacaaggggaaactaatccctttttcgagtttgat
ttttatcgaagaaatctagctcggcgacagactgctaatgtcttaattacaaatcataat
tttttgattaaaaatattgatgaatttgtaaaaaagaataattataatagccccttcttg
gtagttgatgaagcccaacattttgtgagtgatttaaaacaattcaatgaaattattatt
gatttaacaacactcctaaataaggttacaaagattaatgaaaatataaaagactggcta
tttaaaactcagcgcaatggacaagctacccgcctttcacaaaatgatctacagagtact
cagaacgttttgcttagattaacaaatgatattgaggattttcaagcaatcctttttgct
aaatttgtaaaaaaatttacccatacgcagttaacaggacaaccatttgaattagcgatt
gatacatcttttcttcttagaaagaatgcagaatggaaacgaatatacgatgatttagcg
aatggtatggttgcaattcaaaagctgatacagcaaagtaacgaagattatttgttgagt
gaagatcgtgatttgctattgaacattcaaacagacgcggaaatctttgaaattgcgtac
gaaatgatgaaaaaaattatccaaaagaaaccaaaaggagaggtcttttcggtattggtt
ggtgcaaatcatgatcaaaggtcaataagagtagcaagagaaattgctgaagcaactgcc
ttttataactcgaaggtagaaaaaacttttgcaaaaacgttgctaatcggtggaacatta
tttgctggtcataatcgaaagtattttttgcaaaattttgattttaattctgattcgaca
aagattagaacttttaattctgaaattgactacaaaaatagacttaaatttgaggttctc
gactctgatttttcaatatctcaagaaaaaagttaccaaaactatgaacaatttttagca
gaaagtatttataaattaactaagggtattgataaacaaaccttagtgttgtttaattct
ttggaaactttggcacatgtttatgggttattaagaatgacagatctaaatgaggatcgt
aaagttttagcacaaggaattaacggttcccgtgcaaaaataattcgtgagttcaacgat
gaagaaaatgcaattgttttaggagcagcaagtttttgggagggggtggattttccaggt
gaccaattagaatatttaataattaccaggttaccattcagatcgcctgaggataaactt
tcccaattggcaaaggtaacatctaagaatgtctttcagagcttcttacttcctgatgca
ttattaacttttaagcaagggattggtagggttattcggaaaagtgatgatagaggagct
gtcgttgttttagatcgtcgtattatcgatcgtaaatatggcaaacagtttattagtcag
cttcctaatggtgttgaaaacaaaataaatgatgttgaaaaaattagaaatgatttaaaa
aatttttatcgatccaaatga

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