Pediococcus claussenii: PECL_1142
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Entry
PECL_1142 CDS
T01713
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pce
Pediococcus claussenii
Pathway
pce03030
DNA replication
pce03410
Base excision repair
pce03420
Nucleotide excision repair
pce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PECL_1142 (polA)
03410 Base excision repair
PECL_1142 (polA)
03420 Nucleotide excision repair
PECL_1142 (polA)
03440 Homologous recombination
PECL_1142 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pce03032
]
PECL_1142 (polA)
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_1142 (polA)
Enzymes [BR:
pce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PECL_1142 (polA)
DNA replication proteins [BR:
pce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PECL_1142 (polA)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PECL_1142 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PECL_1142 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AEV95404
UniProt:
G8PDR9
LinkDB
All DBs
Position
complement(1133560..1136217)
Genome browser
AA seq
885 aa
AA seq
DB search
MTDKRLLLIDGNSIAFRSFFALQNSLSRFTNADGLHTNAIYGFNKMLDIILDNVNPTDAL
VAFDAGKTTFRTKMYTNYKGGRAKTPSELTEQMPYLRDLLTGYGIKSYELADYEADDIIG
TLSLEAEKLGYRVTIVTGDRDLTQLVSDKTTVAVTVKGVTEVEDYTPEHLKEKLGVTPTQ
VIDLKGLMGDSSDNYPGVTKVGEKTALKLIDQFGSVENLYDHIDDLKQSKMKEHLIEDED
NAFLSKKLATIDRDSPLKIGLDQLEYKGINEEYLIDFYQKMGFKSYLKKFQKSGGLKEVE
QTQFQELTKANLDKAMESLGNEVSLYLEMPEKNYHLSSFAGFVIGNDEKWFVSRNVELLK
LPTIKDLIENIDVKLNVFDSKRTYVGLNRLEINAQCFNYDVLLQSYLLDTNENSNDLGLL
AQQHAYYNVESDADVYGTGAKLSIPDDDQTFFQHLANKGKAIEVLGKALDGELKQNEQDK
LYWEIELPLAIVLAKMEISGIRVDSNRLIQMQSEFAERLSEIEGEIYRLAGEEFNINSPK
QLGRILFEKMRLPIIKKTKTGYSTAVDVLEKLRGESDIVDDILNYRTISKIQSTYVEGLL
KVVHSKDQKIHTTYIQTLTQTGRLSSIEPNLQNIPVRIDEGKKIRQAFVPSKEGWHILSS
DYSQIELRVLAHLTGDKNMQEAFIENQDIHASTAVRIFGLKDASEVTPNIRRQAKAVNFG
IVYGISDYGLSQNIGISRSDAKKFIETYFQEFPGVKNYVDNIVKVAKEQGYVETISHRRR
YLPDINSSNFSQRSFAERTAMNTPIQGSAADIIKIAMIKMQQELESRNLKTKMLLQVHDE
LIFEVPDEEMNEIKKLVPSVMDSAMKLKVPLKVETSWGNNWYEAK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaacgattacttttgattgatgggaacagtattgcgtttcgttcttttttt
gcattacaaaattcactaagtcgattcactaatgctgatggattgcatactaatgctatt
tatggttttaataaaatgctagatattatcttggataatgtaaacccaacagatgcttta
gttgcttttgatgctggaaagacaacctttaggacaaaaatgtataccaattacaagggg
ggacgtgccaaaacaccttcggaattaacagagcaaatgccatatttacgtgatttgcta
acaggatacggaataaagtcgtacgaattggctgattatgaagctgatgatattattgga
actttgtccttagaagcagaaaagcttggatatcgtgtcacaatagtgacgggtgaccgt
gatttaactcagttagtcagtgataagaccacagtggctgttaccgttaagggcgttacc
gaggttgaagattatactccagagcatttgaaagaaaagttaggtgtgacacctacgcaa
gtgattgatttaaaggggttaatgggagacagctcagataattatcctggcgtaactaaa
gttggtgaaaagaccgccttaaagctgattgaccagtttggaagtgttgaaaatttatac
gaccacattgatgatctaaagcaaagcaagatgaaagagcaccttatcgaagatgaagat
aatgcatttttatcaaaaaaattggcaacaattgatcgtgattcccctctaaaaattgga
ttggatcaacttgaatataaaggaattaacgaagaatacctaattgatttttatcaaaaa
atgggatttaaatcctatttaaaaaaatttcaaaaatctggtgggctgaaagaagtagag
caaacacaatttcaagagttaacaaaagcgaatttagataaggcaatggagagcttaggt
aatgaagtatctttgtatttagaaatgcctgaaaaaaattatcatttatcaagttttgcg
ggttttgtaataggcaacgatgaaaagtggtttgtttcccggaatgtcgagttactcaaa
cttccaaccattaaagatttgattgaaaatattgacgtaaaattaaatgtttttgatagc
aagcgaacctatgtgggcttgaatagactagaaattaatgctcaatgttttaattacgac
gttttattacaatcatatttacttgatactaatgagaattctaatgatttaggtttatta
gctcaacaacatgcttattataatgtggaatccgatgctgacgtgtacggcactggtgca
aagttgtctattccagatgatgatcaaaccttttttcagcatctggcgaataagggtaaa
gcaatagaggttttaggaaaagccttggatggcgagttgaagcaaaatgagcaggataaa
ctttattgggaaatcgaattgccccttgcaatagttttggcaaaaatggaaatcagcgga
attagagtagattccaatcggttaatccaaatgcaaagtgaatttgctgaacgattaagt
gaaatagaaggtgaaatttaccgtttggcgggtgaagagttcaatataaactctcctaaa
caattaggacggattttattcgaaaaaatgcgtttgccaattatcaagaaaaccaagaca
ggatactcaacagcggttgatgttcttgaaaaactacgtggggaatctgatattgttgat
gatattttaaactatcgaactatttcaaagatccaatctacctatgttgaaggcctttta
aaagttgtacattcgaaagatcaaaaaattcacacaacatacattcaaactttaacccaa
acggggcgattatcatcaattgaacctaatttacagaatattcccgttcgaattgatgaa
ggaaagaagattcgacaagctttcgtaccctcaaaggaaggatggcacattttatcatcc
gattattctcaaattgagttgcgtgtgctggcacacctaaccggtgataagaacatgcag
gaagcctttattgagaatcaagacattcatgcaagtactgccgttagaatttttggtttg
aaagatgcttccgaagttacacctaatattagaaggcaagccaaagctgtaaattttggg
attgtctatggtattagtgattatggtctttctcagaatattggaatttcacgatccgat
gctaaaaaatttattgaaacttatttccaggaatttcctggggtaaaaaattatgtggat
aatattgttaaagttgccaaggaacaagggtatgtagagacaatttcacaccgtagaaga
tatttaccggatataaactctagtaattttagtcaaaggtcttttgcggagagaactgca
atgaatacaccaattcagggtagtgcagcggatataatcaagattgcgatgataaaaatg
caacaagaacttgaaagtagaaacttaaaaacaaagatgttgctacaagttcatgatgaa
ttgattttcgaggtgcctgatgaagaaatgaatgaaattaagaaacttgtacctagtgtg
atggattcagcaatgaaattaaaggttccgcttaaagttgaaacatcgtggggaaataat
tggtatgaagccaaatag
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