Pediococcus claussenii: PECL_1262
Help
Entry
PECL_1262 CDS
T01713
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pce
Pediococcus claussenii
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pce03009
]
PECL_1262 (rumA)
Enzymes [BR:
pce01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PECL_1262 (rumA)
Ribosome biogenesis [BR:
pce03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PECL_1262 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
Methyltransf_15
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
Ubie_methyltran
RrnaAD
N6_N4_Mtase
Methyltransf_12
CMAS
Methyltransf_4
UPF0020
Methyltransf_23
PCMT
TPMT
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AEV95494
UniProt:
G8PE09
LinkDB
All DBs
Position
complement(1233625..1234989)
Genome browser
AA seq
454 aa
AA seq
DB search
MKTKQPVEKNKQYDVSIEDLTYQGLGVAKIENFPIFITNTLPGEKAKIVVTKVQKTYAFG
RVLEVLQSSPDRVDGLGKEYTQTGIAPLQYLRYDAQLLFKQHQIENLLKKSHLNIHVDNT
IGMDEPYGYRNKAQIPVRTVAEQLETGFFKRNSHDLVPIEDFRIQDTVIDDVIVKVRDIL
RANQVVPYEEVNHQGIIRNVMVRRGRKSGEIMVVLITNKEQFPNSDQVFNEIAAINNVVS
VYQNINNRVTNVMMGDKNILKSGSPVIHDQLLGINFIISPSSFYQVNPVQTEKLYQLAID
KAGLTGNETVLDLYCGIGTISLAMAKHAKRVMGVEVVPEAIHDAKMNAQSNGIDNVEFVI
NKAEDQMKLWAENEIKTDLVVVDPPRKGLAGSVIESIGELQPKKVVYVSCNPATLVRDIG
LFEEQGYEVDGSIIPVDQFPQTPHVESVTVLSLK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaagcaaccagttgaaaaaaataaacagtacgacgtaagcatcgaagatcta
acataccaaggcttaggggtagcgaaaatcgaaaactttccgatttttataaccaatact
ttacctggcgaaaaggccaaaattgttgtaactaaagttcaaaagacctatgcgtttggg
cgagtattagaagttttacaatccagtccagatcgagttgatgggttaggaaaagaatat
acacaaacaggaatcgcacctcttcaatatttgaggtacgacgcgcaactgctgtttaaa
cagcatcaaattgaaaacctattgaagaaaagccatttgaatattcacgttgataataca
attgggatggatgaaccctatggttatcgaaataaggctcaaattcctgttcgaacagtt
gctgaacaattggaaacgggcttctttaaaagaaactcgcatgatttagtaccaattgaa
gattttagaattcaagatacggtcattgatgatgtaattgttaaagtaagggatatcctt
agggcaaaccaagtagtgccttatgaagaagttaaccatcaaggaatcattaggaatgtg
atggttcgacgtggaagaaaatctggcgagattatggttgtattgatcactaataaagag
caatttcctaatagtgatcaagtatttaatgaaattgctgcaattaataacgttgtcagt
gtttaccaaaatattaataatcgagttactaatgtgatgatgggagataaaaatatcctg
aaatctggatcacctgtaattcatgatcaactattaggaattaactttattatttcgcca
agttcgttttatcaggtaaatccagttcagactgaaaaactatatcaattggctattgat
aaggctggactaactggcaatgaaactgttttggatttatattgtggaattgggacaatt
tccttagcaatggcaaagcatgctaaacgggtaatgggtgtcgaagtagtaccagaagct
attcatgacgctaagatgaatgcacaaagcaacggaattgataatgtggaattcgtaatc
aataaggccgaagatcagatgaagctgtgggcagaaaatgaaattaaaactgatctagtt
gttgtggatccaccacgtaagggtcttgcaggtagtgtgatcgaaagcattggggaatta
cagccaaagaaggttgtatatgtcagttgtaatcctgccaccttggttcgcgatattgga
ttatttgaagaacaaggttatgaggtagatggttcaattattccggttgatcaatttcca
cagacaccccatgttgaaagcgtaacggttttgagccttaaataa
DBGET
integrated database retrieval system
