Pediococcus claussenii: PECL_1268
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Entry
PECL_1268 CDS
T01713
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pce
Pediococcus claussenii
Pathway
pce03420
Nucleotide excision repair
pce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PECL_1268 (pcrA)
03430 Mismatch repair
PECL_1268 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_1268 (pcrA)
Enzymes [BR:
pce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PECL_1268 (pcrA)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PECL_1268 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
PECL_1268 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEV95500
UniProt:
G8PE15
LinkDB
All DBs
Position
complement(1240533..1242797)
Genome browser
AA seq
754 aa
AA seq
DB search
MAGTDLLQGLNDKQAEAVQATEGPLLIMAGAGSGKTRVLTHRVAYLIEEKQINPWNILAI
TFTNKAAREMKERIHGLLGDEASNIWVSTFHSLCVRILRQNIEQIGYNRAFSIADPSEQR
TLVKHILADLNLDPKKNDPRSLLGTISNAKNELLTAEDYREKSVTPYEKIVAEVYDEYQR
RLKLNQALDFDDLIMKTIQLFKEHSETLEFYQRKFHYIHVDEYQDTNEAQYQLVTMLAKK
FKNICVVGDSDQSIYGWRGADMQNILNFENDYPQATVVKLEQNYRSTKNILDAANNVIKN
NSERKPKDLWTDNDKGDLVSYYRGQTGTDEVHFIVQQIQKQIAENNYNFGDFAVLYRTNA
QSRAVEDVFLKANIPYTMVGGSKFYDRKEIRDVLGYLTLIANQDDSLSFERIINEPKRGI
GSTSLTKLQSFADESDWSLLNAARNVQIANGISSRARNSIENFAKMIDDLRKMAQYISIS
ELTEEVIDRSGYRSVLQESKTMESEARLENIEEFLTVTKEFDERNENEDDVDGSTRLADF
LADLALVSDQDSVEEEPTAVTLMTLHAAKGLEFPIVFLIGMEDGIFPLSRAMMDQDQLEE
ERRLAYVGITRAQKKLYISNAFSRMLYGKTQANPASRFIDEIGEEYLKSENQNTFSSSNT
TARGEKAYPFDKNRQARATASVYGRSTPLVAASKGTGAGALKWNTGDKVQHKAWGVGTVV
KVSGSGEDAELDIAFDGQGIKRLLAAFAPITKVQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcggggacagatttattacaaggactaaatgataaacaggctgaagcggtacaagca
acggaagggccactattaattatggcaggtgcaggaagtgggaaaacgcgtgttttaaca
catcgagtagcctatttaattgaagaaaaacagataaatccctggaatattttagcaatt
acatttacaaataaagcagcaagagaaatgaaagagcgaatacacggattattaggtgat
gaggcctcaaatatttgggtatcaacctttcattcattgtgtgttcggatcctaagacag
aatattgaacaaattggctacaatcgtgcattctcaattgctgatcctagtgaacagcgt
acgcttgtaaaacatatcttagcagatcttaatttagatcctaaaaagaacgatccacgc
tcccttttaggaacaatttcaaatgccaaaaatgagttgttaacggcggaagattatcgt
gaaaaaagtgtaaccccatatgagaagattgttgctgaggtttatgatgaatatcaacgt
aggttaaagcttaatcaagcacttgattttgatgacttaatcatgaaaactattcagtta
tttaaagaacatagtgaaacacttgaattttaccaacgtaaatttcattatattcacgta
gatgagtatcaagatactaacgaagctcaataccaattagtaacgatgttagccaaaaag
tttaaaaatatttgtgtggtgggtgattctgatcagagtatttatggatggcgaggcgcc
gacatgcaaaatattttgaactttgaaaatgattaccctcaagcgacagttgttaaactt
gaacaaaactatcgctctaccaaaaatattttggatgcagcaaataacgttataaagaat
aattctgaaagaaaacctaaagatttatggacagataatgataagggagatttagtatct
tattaccgaggacagactgggactgatgaagttcatttcattgtccaacaaatacaaaaa
caaatcgctgaaaacaactataattttggtgactttgctgttttgtaccgaactaatgca
caatcgcgagcagttgaagatgtgtttctaaaggctaatatcccgtatacaatggttgga
ggcagtaaattttatgatcgaaaagaaattcgggatgttcttggttatttaacattaatt
gctaatcaagacgattctttaagttttgaaaggattattaatgaacctaaacgaggcatt
ggtagtacatctttaactaagttacaaagctttgcagacgaaagtgattggtcgttgtta
aatgccgcaagaaatgttcagattgcaaatggaatttcttcaagagcacgtaattcaatc
gaaaattttgcaaagatgattgatgacttgcgcaagatggctcagtatatttcgatttct
gaactaacggaagaagttattgaccggtccggttatcgatcagtactgcaagaatcaaag
acgatggagtcagaagcacgcttagaaaatatcgaagaatttttaactgtaacaaaggaa
tttgatgaacgcaatgaaaatgaagatgatgtcgatggttcgacaagattggcagatttc
ttggcggatttggcattggtttcagatcaagattcggttgaagaggaaccaacagcagtt
actttaatgactttgcatgctgctaaaggattggaatttccgattgtctttctgattgga
atggaagatggaattttcccattgtcacgcgcaatgatggaccaagatcagttagaagaa
gagcgtcgattagcatatgttgggattactcgtgctcaaaaaaagctgtatattagtaat
gctttctcgcgaatgttgtatgggaaaacacaagcaaatccagcttcacgttttattgat
gaaataggggaagaatatttaaagagcgagaatcaaaatactttcagcagctcaaatacg
acagcacgaggcgaaaaagcctatccttttgataaaaatcgtcaggcaagagctactgca
agcgtttatgggaggtccacacctcttgttgctgcaagcaaaggtactggagcgggcgct
ttgaagtggaacactggtgataaggtacaacataaagcttggggtgttggtacggttgtg
aaggtctcaggcagtggtgaagatgcagaacttgatattgcttttgatggacaaggtatt
aagcgactattagctgcatttgcaccaattactaaagttcagtaa
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