Pediococcus claussenii: PECL_1281
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Entry
PECL_1281 CDS
T01713
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pce
Pediococcus claussenii
Pathway
pce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PECL_1281 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pce03021
]
PECL_1281 (rpoA)
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_1281 (rpoA)
Enzymes [BR:
pce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PECL_1281 (rpoA)
Transcription machinery [BR:
pce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PECL_1281 (rpoA)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PECL_1281 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AEV95513
UniProt:
G8PE28
LinkDB
All DBs
Position
complement(1251971..1252915)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPKIHKVDEKSNYGRFVVEPLERGYGTTLGNSLRRILLSSLPGAALTSVQIDGVL
HEFSTIEGVVEDVTQIILNLKKVSLKVESDEEKSLEINVMGPANVTAGDIVGDGDVTILN
PELPICTVAEGTTFHAVLTAEKGRGYTSADENKARKVDMPIGVLPIDSIYTPIERVNYQV
ENTRVGQRDDYDKLTLDVWTDGSLAASEAISLSAKILTEHLTIFVNLDDQAKDTEIMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTDRTEAQMMKVRNLGRKSLVEVE
EKLAALGLGLRSED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgagaagccaaaaattcataaagttgatgaaaagagtaactacggccgt
tttgttgtggaacctttggaacgtgggtatggtacaacattggggaattctctccgacgt
attttactttcatctttaccaggagcagctttaacaagtgttcaaatagacggtgtttta
catgaattctcaactattgagggtgttgtagaagatgttacccaaattattttgaacttg
aagaaggtttccttaaaagtggaatctgatgaggaaaagtcattagaaatcaatgttatg
ggacctgccaatgttactgctggagatatcgttggagacggagacgtcacaatcttaaat
cctgaattaccaatttgtactgttgctgaaggtacaacgttccatgcagttcttactgct
gaaaaaggtcgcggatatacctctgcggacgaaaataaggctcgaaaggttgatatgcct
atcggagtattaccaatcgattctatttataccccaattgaacgtgttaattaccaagtt
gaaaacacacgtgttggtcaacgtgacgattatgacaaactcactcttgatgtttggact
gatggttcgttggcagctagtgaagctattagcttatcagcaaagattcttactgagcat
ttaacaatttttgttaaccttgatgatcaggctaaagatactgaaatcatggttgaaaaa
gaagaaactcataaagaaaaaatgttggaaatgacgattgaagagttagacctttcagtt
cgctcatacaattgtttgaaacgtgctggaattaatactgttcaagaattaactgatcgt
accgaagctcaaatgatgaaggttcgtaaccttggtcgtaagtcacttgtcgaagttgaa
gagaagttggcagcattaggacttggattacgttcagaagactaa
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