Pediococcus claussenii: PECL_1682
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Entry
PECL_1682 CDS
T01713
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pce
Pediococcus claussenii
Pathway
pce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PECL_1682
09124 Replication and repair
03420 Nucleotide excision repair
PECL_1682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pce03021
]
PECL_1682
03036 Chromosome and associated proteins [BR:
pce03036
]
PECL_1682
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_1682
Enzymes [BR:
pce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PECL_1682
Transcription machinery [BR:
pce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PECL_1682
Chromosome and associated proteins [BR:
pce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PECL_1682
DNA repair and recombination proteins [BR:
pce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PECL_1682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD
DEAD_2
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
AEV95899
UniProt:
G8PBB0
LinkDB
All DBs
Position
complement(1623862..1626216)
Genome browser
AA seq
784 aa
AA seq
DB search
MQPKIGIRQLVEFVLRSGDLNEQMNSQNTAFEGARIHRKLQSERPESYEKEYYVQREVDI
AGTPYIVDGRADGVVANDTLWIEEIKTSDPKFEDLSENTKTLYWGQAKVYGAILTQDLDY
ETVKIQLTYYQRPTDKIVTEEHEYSREELQDFFNNLVHEYERWIKLRNEWRDKRNNSIHQ
TDFPFPEYRNGQRELAVAAYKTVLTGQRLFIEAPTGTGKTISTLFPVIKAVGEGKIDRVF
YLTAKQSTRGVAEDGINLMVEKGLQIKSITLTAKEKMIFPEEVDVKPDQNPFMVGYYDRV
KDGLLDVLENENQLTKNLIQKYARKHSLDPFEFSLDLSLFCDVIIGDYNYLFDPMVYLQR
FFAGDDDDNFFLIDEAHNLVSRSRDMYSADLNEGLVVRVRTLLDKSTSAVESKQLKRRLT
QLNNELKLIKNNFEERAQGNFVATTEPLDDIEKAILNFNEVTREWLPKQPDSDLTSSVLD
LFFAGNKYIKIGEFYDNSYRVLMSKDDDGNLLIQEKILDPSPYLNKSLEKGHGALFFSAT
LSPIDYYKDTFGSSDGLVMQLSSPFEMKQQNIIVTTYVDTKYAARINNIPNIVASINALV
NAKQGNYLIFCPSYGFMKQIVMEFQSRNPATDVVIQNGGMNENERQDFLDAFRVKSDKNL
VGFAVLGGVFSEGIDLTEEQLIGVGIVSVGLPGLSEERKLLQEYFDEKNGRGFEYAYQLP
GMNHVLQAAGRLIRTSKDRGNVVLMDQRFATRRYTDLFPRHWNYFKKAYSVEQLEQQIQS
FWSN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacctaaaattggaattcgacagttggtggaatttgtattgcggtcaggtgactta
aacgaacaaatgaatagtcaaaatactgcttttgagggtgcacgtattcaccgaaaattg
caaagtgagaggccagaaagctatgaaaaagaatattatgttcaacgtgaagtagatatt
gcaggaactccatacatagttgatggacgtgcagatggagttgtcgccaatgatactttg
tggatagaggaaatcaaaacatcagatcctaagtttgaagatttgtctgaaaatactaaa
acgttatattgggggcaagctaaagtttatggtgcaattctgacacaggatttggattac
gaaacggtgaagattcagctaacgtattatcagagaccgacggataaaatagtaacggaa
gagcacgaatattctcgtgaagagctacaagatttttttaataacttagtacatgaatat
gagcgttggataaagttgagaaacgagtggcgagataaacgaaataatagtattcatcaa
accgattttccgtttcctgaatatcgtaatggacaacgggaattagctgtagcggcttac
aaaacagttttaacgggtcaaagactatttattgaggcgccaactggtactggaaaaaca
atatcaactttatttcctgtaataaaagcggtaggtgaagggaaaatcgaccgagtattc
tatttaactgctaaacaaagtacacgtggtgttgcagaagatgggattaacctaatggtt
gagaaaggtctgcaaataaaatcaataacattgactgctaaggaaaaaatgatttttcct
gaagaggttgatgttaaacccgaccaaaatccatttatggtggggtattatgaccgggta
aaagatggattattagatgttcttgaaaatgaaaatcaactaacgaagaatcttattcaa
aaatatgcaagaaaacatagcttagatccatttgagttttcactggatttatcgcttttt
tgtgacgtgataattggcgattataattatttgtttgatccaatggtgtatttacagcgt
ttttttgctggggatgacgatgataatttcttcttaattgatgaagctcacaatttagtt
tcccgctcacgagatatgtactcagctgatctgaatgaagggttagtagtaagggttaga
acattgttagataaatcaacttcagcagtggaatctaagcagttgaaacgacgtctaaca
caacttaataatgaacttaaattgattaaaaataattttgaagagagagcacagggtaac
tttgttgcaactactgaacctctagatgacattgaaaaggcaattctgaacttcaatgaa
gttacacgagagtggttacccaagcaaccggatagtgatttgactagcagtgtgttagac
cttttttttgctggaaataagtatattaagattggcgagttttatgataatagctataga
gtattgatgagtaaagatgatgatggtaatttattgatccaagagaaaatattagatcca
agcccatatttaaataagtcgttagaaaaggggcatggagcattgttcttttcagcaact
ctttcgccaatcgattactacaaggacacatttggtagttcagacggacttgtgatgcaa
ttgagttcaccatttgaaatgaagcaacaaaatattatcgtgacaacttatgttgataca
aaatatgcggcaagaattaataacatcccgaatatagtagcgtcaattaatgctttggtg
aatgctaaacaaggcaattacctgattttttgtccgtcttatggatttatgaaacagatt
gtcatggaatttcaaagccgcaatcccgcgacagacgttgtgatccaaaatggcgggatg
aatgaaaatgaaagacaagactttttggatgcgtttcgagtgaaatccgataagaattta
gttggatttgctgtacttgggggtgttttttcagaagggattgatctaaccgaagagcag
ttgattggagttggaattgtgagtgttggtttgccaggcttaagtgaagaacgcaaactt
ttacaagaatactttgacgaaaagaatgggcgtggatttgaatatgcctaccaacttccg
gggatgaaccatgtattacaagcagcggggcgtttgattcgaactagcaaggatcgtggc
aatgtagttttaatggatcagagatttgcaacccgaagatatactgatctttttcccaga
cactggaattattttaagaaggcctattcggttgagcaacttgagcaacaaatacaaagt
ttttggtctaattga
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