Pediococcus claussenii: PECL_376
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Entry
PECL_376 CDS
T01713
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pce
Pediococcus claussenii
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_376 (radA)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PECL_376 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
ABC_tran
SLFN-g3_helicase
AAA_24
nSTAND3
KdpD
AAA_16
AAA_14
DUF7125
CbiA
AAA_5
AAA
KTI12
NPHP3_N
NTPase_1
GvpD_P-loop
Rad51
AAA_19
DUF7129
AAA_30
HypA
NACHT
DZR
Motif
Other DBs
NCBI-ProteinID:
AEV94684
UniProt:
G8PB55
LinkDB
All DBs
Position
379698..381068
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AA seq
456 aa
AA seq
DB search
MAKTKTQFMCQECGYVSPRYLGKCPNCGRWNTFVEERISEPKEERKSRVSFEGKKSKPQL
IKQVSMAEEPRVKTAMEEFNRVLGGGVVAGSLVLIGGDPGIGKSTLLLQMSGQLAATGRD
VLYVSGEESATQIKMRADRLKVQSENFYLYPETDMKNIRDSIEKLHPGFVVIDSVQTMQE
PDIESAVGSVSQIREITAELLQISKTNNITIFIVGHVTKGGAIAGPKILEHMVDTVLYFE
GDLHHTYRILRAVKNRFGSTNELGIFEMREEGLREVSNPSEIFLEERLTDANGSAIVVSM
EGTRPILVEIQALITPTIYGNAQRTASGLDRNRVSLIMAVLEKRANLTLQNQDAYLKAAG
GVKLDEPAIDLAIAISIVSSFRNQGTEATDSFIGEIGLTGEIRRVNRIEQRVNEAKKLGF
KRIFIPKNNLQGWSAPKGIEVVGVATITEAIHKAFN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagacaaaaacgcagtttatgtgtcaagaatgtggatacgtatcgccacgatac
ttgggtaaatgccctaattgtggacgttggaatacttttgtggaagaacgaatttcagag
cctaaagaagaacgcaaaagtcgagtcagctttgagggtaagaaaagtaaaccacaatta
atcaaacaagttagcatggctgaagaaccccgagttaaaactgcaatggaagaatttaat
cgagtacttggtggtggagtggttgctggttcgttggttttgattggtggcgatcctgga
attggtaagtcaactttattactgcaaatgtcggggcaactagcagcaactggacgagat
gtgttatatgtttctggtgaagaaagtgccacgcagattaagatgcgagcagatcgacta
aaagtgcagagcgaaaacttttatttatatccagaaacagacatgaaaaatattcgtgat
tcaattgaaaagctacatcctggatttgttgtgattgattcggttcaaacgatgcaagaa
ccagatattgaatctgcagttggtagtgtgtcacagattcgtgaaattacggcagagctt
cttcaaatttctaaaaccaataatataacaatctttattgttggacatgtaacgaagggc
ggagcaattgcgggtcccaagattttggaacatatggttgacaccgttttatactttgaa
ggtgatttacaccacacatatcgaattttacgtgcggttaagaatcgttttggatcaacc
aatgagctcggtatttttgagatgcgagaggaaggcctacgggaggtatctaatccgtcc
gaaatttttctggaagagcgtctaactgatgcgaatggctctgcaattgttgtttcaatg
gagggaacgcgtccaattctggttgaaattcaggccttgattacgccaactatctatgga
aatgcccaaagaactgcaagtggattagatcgaaaccgtgtatctttaattatggcagtt
ttagagaagagggctaacctcacattacaaaatcaagatgcctatttaaaagcggcaggt
ggagtgaaactagatgaaccagcaattgatctagcaattgcgattagtattgtgtctagc
tttagaaaccaaggaacagaagcaacggatagttttattggcgagatcggtttgactggt
gagattagacgtgtgaaccggatcgagcaacgtgttaacgaagctaaaaagttgggcttt
aagcgaatctttattcccaagaataatctacaagggtggtcagcacctaaaggaattgag
gtagttggagttgcaacgataactgaagcaattcataaggcttttaattaa
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