Pediococcus claussenii: PECL_496
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Entry
PECL_496 CDS
T01713
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pce
Pediococcus claussenii
Pathway
pce03030
DNA replication
pce03430
Mismatch repair
pce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PECL_496 (dnaX)
03430 Mismatch repair
PECL_496 (dnaX)
03440 Homologous recombination
PECL_496 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pce03032
]
PECL_496 (dnaX)
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_496 (dnaX)
Enzymes [BR:
pce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PECL_496 (dnaX)
DNA replication proteins [BR:
pce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PECL_496 (dnaX)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PECL_496 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
AAA_22
RuvB_N
DNA_pol3_gamma3
AAA_19
AAA_5
TIP49
AAA_14
AAA_24
AAA_7
Laminin_II
DnaX_C
FlxA
T2SSG
AAA_assoc_2
AAA_16
DUF3135
Uds1
AAA_18
Mg_chelatase
RNA_helicase
DUF2992
Cytidylate_kin
AAA_28
BORCS6
ODAD1_CC
Rit1_C
DUF3573
TSC22
Csm1_N
Motif
Other DBs
NCBI-ProteinID:
AEV94798
UniProt:
G8PBP9
LinkDB
All DBs
Position
500150..501892
Genome browser
AA seq
580 aa
AA seq
DB search
MSYQALYRVWRPQNFGDMVGQEVVTRTLKNALITKQISHAYLFTGPRGTGKTSAAKIFAK
AVNCHFLKDGEPCNECITCRAINNGSLNDVIEIDAASNNGVEEIRDIRDKAKYAPTEADY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFVLATTEPQKIPLTIISRTQRFDFRRISA
QESYDRMVYILDQKKVDYDPSALRVVARAAEGGMRDALSILDQVLSFGDNEVTLENALLV
TGSVNEELLNQYLTQIFSKQTSLALETLHKILAEGKDGQRFGEDLIVELRNLLLYQQDPA
LVEEQNLGELSEQFIESAKQVTSEELYGMIDTLNMITQQMRFTTHPDVYLEVLTIKLCNR
SSGNSESTDSVSTVQSSEVEELKKQVQNLQQQIKQVKIGTESQPHTKQTLRPQNSVPKKS
KKTTRTPANLTKIYPILEAATKDNLNEMQNLWRDLMNMLSVTQRALMHVSKPVAASKEGV
VVAFDYDFLFEKAVDNDSLRSEMEANLAKLTGSEFKIAYVTVEEWPEVRAGFLKNHSVGS
QKEQVDGPETGVEQPVEKNSEIIDKAVELFGSENIEIKND
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagcgttataccgagtgtggcgtcctcagaactttggtgacatggttgga
caagaggttgtaactagaacattaaagaatgcccttataaccaaacagattagtcatgca
taccttttcaccgggccgagaggaactggtaaaacttcggctgctaagatttttgcaaaa
gcagtaaattgtcactttctaaaagatggtgaaccttgtaatgagtgtattacctgtcgt
gccattaataatggtagtttgaatgatgttattgagattgacgctgcatcaaacaatggt
gtagaagagattcgcgatattcgtgacaaggctaagtatgcacccacggaagcagactac
aaggtttacattattgatgaagtgcatatgctttcaacaggagcatttaacgccttattg
aaaacactagaagaaccacctgctaatgttatcttcgtgctcgcgacaaccgaacctcag
aaaatcccgttgactatcatttcgagaacgcaacgttttgattttcgaagaatttcagct
caggaaagttacgatcgaatggtctacatcttagatcaaaaaaaggttgattacgatcca
agtgctttgagagtagtggctagggctgcagaaggtggaatgagggatgccttgagtatt
cttgatcaggtactttcattcggggataatgaagttactttagaaaacgccttattggta
actggtagcgttaacgaagaacttttaaatcaatacttaacacaaatttttagtaagcag
acttctctagcgttagaaacacttcataagattcttgctgaaggtaaagacgggcaacgt
tttggtgaagatttaattgttgaactgcgtaatttgctattatatcaacaagatccagcc
ctagtggaagagcaaaatcttggagaactttcagagcagtttattgaatccgctaaacag
gttacaagtgaagaattatatggcatgattgatacattaaacatgattactcagcagatg
cgatttactactcatccggatgtttacctagaagtattgacgattaaactatgcaatcgc
tcaagcggaaatagcgaaagcactgattctgttagcacagttcagtcatctgaagttgaa
gaattaaagaagcaggttcaaaatttacagcaacaaattaaacaggttaaaattggaacg
gaaagtcagccgcataccaaacaaacgttgaggcctcaaaatagtgtccctaagaaaagt
aaaaaaactacaaggacacctgctaatttgactaagatttatccaatattagaggcggct
accaaggataatttaaatgaaatgcaaaatttgtggcgcgatttaatgaatatgttaagt
gtgactcagagggcattaatgcatgtttctaaacctgtggcagcaagcaaagaaggtgtg
gtagttgcctttgattatgattttcttttcgaaaaggcagttgataatgatagtttaaga
agcgagatggaagctaatcttgcgaagctaactggttccgagtttaaaatagcatatgtt
acagttgaagagtggcctgaggttagagcaggttttcttaaaaatcactcagttggaagc
cagaaggagcaagttgatgggcctgaaactggtgttgaacagcctgttgaaaaaaacagt
gaaattatagataaagcggtcgaactctttggctctgaaaatattgaaataaaaaatgat
taa
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