Pediococcus claussenii: PECL_567
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Entry
PECL_567 CDS
T01713
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pce
Pediococcus claussenii
Pathway
pce03030
DNA replication
pce03430
Mismatch repair
pce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PECL_567
03430 Mismatch repair
PECL_567
03440 Homologous recombination
PECL_567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pce03032
]
PECL_567
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_567
Enzymes [BR:
pce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PECL_567
DNA replication proteins [BR:
pce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PECL_567
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PECL_567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
DUF4209
Motif
Other DBs
NCBI-ProteinID:
AEV94867
UniProt:
G8PC48
LinkDB
All DBs
Position
complement(573587..574123)
Genome browser
AA seq
178 aa
AA seq
DB search
MNFIAMDFETAAPNRDSACSIALTIIQNNQITDELYSLINPEVEFNWRNIQVHGIHEEDV
VDAPTFPELWPYISEFFTPDQIVVAHNASFDNSVLKKTLERYQIGRLPYLSIDTLKTSKQ
FYPFLPNHKLNTLCSSLGIELDHHHNALDDSKACANILLKETEEFGPESIQPFVRNIS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatagcaatggatttcgaaaccgctgcaccaaaccgtgatagtgcttgctca
atcgcgcttaccattattcaaaacaatcagataacagatgaactctattccctcatcaat
cccgaagttgaattcaactggcgtaatatacaggttcatggcattcatgaagaagatgtt
gtagacgctcccacttttccagaactttggccatacatcagtgaatttttcacaccagat
cagattgttgtggctcacaatgcttcctttgataatagcgttcttaagaaaactctggaa
cgttaccaaattggtcgtctaccatatctatcaattgatactctaaaaacttctaagcaa
ttttatccattcctccccaaccacaagctgaatactctttgcagcagcctaggaattgag
cttgatcatcaccataacgctcttgatgatagcaaggcatgcgcaaatattcttcttaag
gaaactgaagaattcggaccagaatcaattcaaccatttgttcgcaatattagttaa
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