Pediococcus claussenii: PECL_985
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Entry
PECL_985 CDS
T01713
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
pce
Pediococcus claussenii
Pathway
pce03030
DNA replication
pce03430
Mismatch repair
pce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PECL_985 (polC)
03430 Mismatch repair
PECL_985 (polC)
03440 Homologous recombination
PECL_985 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pce03032
]
PECL_985 (polC)
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_985 (polC)
Enzymes [BR:
pce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PECL_985 (polC)
DNA replication proteins [BR:
pce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PECL_985 (polC)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PECL_985 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
T2SSK
PBP-Tp47_a
Motif
Other DBs
NCBI-ProteinID:
AEV95253
UniProt:
G8PDB8
LinkDB
All DBs
Position
complement(985360..989676)
Genome browser
AA seq
1438 aa
AA seq
DB search
MSLSEQEQFQTLLEHIGLLNYDDNNLKTGKIKNLIIHKESKEWEFYFEFEDVLDFETFLN
FQNHLKNEFKAIAQIKYQIIPKKADLNVRKVLSYWDWVVKNSDVKSSVVQQICEKAVPKF
EDGQLTISVPDEVAQSFFTDEVTKSFSKYYQMIGFSNISIKTKVDASNSETSFQEYHEAK
KQKDQELAQRATAAIQMRENKRKEQAVDASFNEGPVQIGKPISPKENVTQLRDVNQEERS
LLIEGYIFDVEIRTLRSERQLLIFKVTDYTSSITVKKFSKNDSDEQAFANVKKGIWVKVR
GSVQEDTFMKDLTMNAYDVEEIKHAERKDRSDEKRVELHLHTNMSQMDATNSISDYVIQA
SKWGHRAIAVTDHSGLQAFPEAYAAAKKNNIKMLFGVEANLVDDGVPIGYNNKHTPLKGA
TYVVFDLETTGLSAIYDKVIELSAVKMQDGNVIDQFEEFIDPGFPLSETTINLTSITNEM
VHGSKSEEEIFKSFREFYGDSIIVGHNVTFDVGFMNTGYLRHNMKEITNPVIDTLTLARF
LYPTLKGYRLNTLAKKFSVNLEHHHRAIYDAETTGHLYFKFLKDAEEQYDIVYHDQLNDH
MSDNDAYKHARPNHAILIAKTQDGLKNLFKLVSKSNVEYFYRVPRIPKSELKELRDGIIV
GSACSSGEVFTAMMQKGYAEAKAKAKFYDYLEVMPKPVYQQLLDQELVSGTKNLEEIIEN
IIKLGDDLGKPVVATGDVHYLNQNDSIYRQILIGSQGGANPLNRSALPDVHFRTTDEMLS
DFSFLGDKQARKIVIENTNQIADSVDDISPVKNKLYTPKMPGAEDRIRQLTMDQAHALYG
ETLPEIVQERLDKELKSIIGNGFSVIYLIAQRLVHKSNKDGYLVGSRGSVGSSLVATMSG
ITEVNPLPPHYRCPNCQYSSFFTKGEYGSGYDLPDKNCPKCDTEMIGDGQDIPFETFLGF
KGDKVPDIDLNFSGDYQPIAHNYMQVLFGKDNVFRAGTIGTVADKTAYGYVKAYERDHNI
HLRGAEIDRLSQGATGVKRTTGQHPAGILIVPDYMDIYDFSPIQYPADDQTAAWKTTHFD
FHSIHDNILKMDILGHDDPTMIRKLQDLSGIEPKSIPTDDPNVMKIFSGPDVLGVSEDQI
NSKTGTLGIPEFGTRFVRGMLEETHPKNYSELLQISGLSHGTDVWLGNAEELIKAGTVTI
KDVIGCRDNIMMDLIHYGLDSQSSFQIMESVRKGKGIPEGFEEKMRSANVPDWYIESCGK
IKYMFPRAHASAYVLMALRIAYFKVYFPLAYYAAYFTVRADDFDIVSMSHGKESVKAKMT
EINEKGREASTKEKNLLTVLELANEMIERGFEFGMVDIEHSDAEEWIIEGKRLLAPFNSI
PGLGDNVAKQIVAARADKPFLSKEDLAKRGHVSASLIEFMTINNVLSELPDENQLSLF
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttatcagaacaagaacagtttcaaacgttgttagagcacattggacttttaaat
tacgatgataataacttgaagaccggtaaaataaaaaatttaataattcacaaggaatct
aaggagtgggagttttattttgaatttgaggatgtgttagattttgagacgtttttaaat
tttcaaaatcatcttaaaaatgaatttaaggcgattgcccaaattaagtatcaaataatt
ccgaaaaaggctgacttgaatgttagaaaagtactatcctactgggattgggtagttaag
aatagtgatgtcaagtcttcagttgttcagcaaatttgtgaaaaagccgttcctaaattt
gaagatggccaactaacgatttctgtacctgatgaagttgcacaaagcttttttactgac
gaggtgactaaatcattcagcaagtattatcaaatgattggcttctcaaatatttcgatt
aagacaaaggtggatgcctctaattctgagacctcgtttcaagaatatcatgaagcaaag
aagcaaaaggatcaggaacttgcccaaagagcgaccgccgcaattcagatgcgagaaaat
aaacgaaaagaacaggctgtcgatgcaagtttcaatgaaggacctgttcagattggaaaa
ccaatttctccaaaagaaaatgtcacgcaattgcgagatgttaatcaagaagaacgatcg
ttgttaattgagggatatatttttgatgtcgaaattcgcacactacgttcagaacgtcag
ctacttatctttaaagttacagactatacttcttcaattacagttaagaaattctctaaa
aatgacagcgatgaacaagcatttgctaacgtaaaaaaagggatttgggttaaagttcga
ggaagtgttcaagaagatacttttatgaaggatctaacaatgaatgcttatgatgtggaa
gaaattaaacacgctgagcgaaaagaccgatcagatgaaaaacgagtagaattgcatctg
cataccaatatgagtcaaatggatgccacaaacagtatttcagattacgttattcaggca
tcaaaatggggccatcgagcaatagcggttacggatcattctggtttgcaggcattccca
gaagcatacgccgcagccaagaaaaataacataaagatgctatttggagttgaagctaat
ctagttgatgatggagttccaattggatataacaataagcatacgcccctgaagggtgca
acatatgtcgtgtttgatttggaaaccacgggtttatcagcaatttatgataaggtaatt
gaattatcggctgtgaaaatgcaggatggtaatgtaattgatcaatttgaagaatttatt
gatccagggtttcctttatctgaaaccacaattaatttgaccagtattactaatgaaatg
gttcatggttcaaaaagtgaggaagaaatttttaaatcatttagagaattttatggtgat
tcaataattgttggtcataatgttacctttgatgtaggttttatgaacactggttatctt
agacataacatgaaagaaattactaacccagtaattgatacacttacacttgctcgtttc
ttgtatcctactttaaagggctacagattaaatacgttagcaaagaaatttagtgttaat
ttagagcatcatcatcgtgctatttatgatgctgagacaacaggacacttgtattttaaa
tttttaaaagatgcagaagaacaatatgatatcgtttaccatgatcagttaaatgatcat
atgagtgacaatgatgcatataaacatgctcgtccaaatcatgcaattttaattgcaaaa
actcaggatggtttaaaaaatctatttaaactagtttcaaagtcaaatgttgaatatttt
tatcgcgttccgcgtattccaaagtcagaattgaaagagctacgcgacggcattattgtt
ggatccgcctgttcaagtggggaagtatttactgcaatgatgcaaaagggatatgccgaa
gcaaaggcaaaagcaaaattttatgattatcttgaagtgatgcctaaacctgtttatcag
cagttgttggatcaagaacttgtgagcggaactaagaacctcgaagagataatagaaaat
atcattaaattgggtgatgatttagggaaaccagttgttgcaactggtgatgttcattat
ctaaatcaaaatgattcaatttatcgtcaaattctgattggatcgcagggcggagctaat
ccacttaatagatcggcacttcctgatgttcatttcagaaccacagatgaaatgctaagc
gatttttcatttttaggagataaacaagctcgtaaaattgttattgaaaatacaaaccag
attgctgattcagttgatgatattagtccagtgaaaaataagctttacacgcctaaaatg
cctggggcagaggatcgtataaggcagttgacaatggaccaggctcatgcgctttacgga
gagacacttccagaaattgttcaagaacgcttggacaaagaattaaaaagtatcattgga
aacggtttttctgttatttatttgatcgctcaacggttagttcacaagagtaataaagat
ggatatttagttggctctcgtggctcggttggctcaagccttgttgctactatgtctgga
attactgaagtaaatccattgccgccacattatcgttgtccgaattgtcaatattcaagc
ttctttacaaaaggcgaatacggctctggatatgatttgcccgataaaaattgtcctaag
tgtgatactgaaatgatcggcgatgggcaagatattccttttgaaacatttttgggattc
aagggtgataaagttcccgatattgatttaaatttttctggtgactatcaacctattgca
cataattacatgcaggttttatttggtaaggataacgttttcagggctggtaccattgga
acagtcgcggataagactgcatatggatacgttaaagcatatgaacgagatcataatatt
caccttagaggtgctgaaattgatcgcctttcccagggagccacaggtgtcaagcgaact
actggacaacatccggctggaattttaattgtaccggattacatggatatttatgatttt
agtccgattcagtatccggcagacgaccagaccgctgcttggaaaacaacccattttgat
tttcattcaattcatgacaatattttgaagatggatattttgggtcatgatgatcctact
atgatacgtaagcttcaagatttatcagggattgaaccgaagagtatcccaactgatgat
cctaatgttatgaaaattttttctggaccggatgttttaggcgtttcagaagatcaaatt
aattcaaaaaccggaacacttggaattccagagtttggaacacgatttgtacgtggaatg
ttagaagaaacgcatccaaagaattactcagagttattgcaaatatcgggtttgtcacat
ggtaccgatgtttggctgggaaacgctgaggaattgattaaagccggaacggttacaatt
aaagatgtcattgggtgtcgtgataatatcatgatggatttaattcattatggtttagat
tctcaatcatctttccagattatggagagtgttcgtaagggaaaggggattcctgaaggt
tttgaagaaaaaatgagaagtgctaatgttcctgattggtatattgagtcatgtggaaaa
attaaatatatgtttccacgcgctcatgcttcggcatatgtcttgatggcacttcgaatt
gcttatttcaaagtatattttcctttagcatattatgccgcttattttacggttcgagct
gatgattttgatattgtctctatgtctcatggaaaagaatctgtgaaagctaagatgacc
gaaataaacgaaaaaggccgggaagcatctacgaaggagaaaaacttattaactgttctt
gaattagcgaatgaaatgatagaacgaggttttgaatttggaatggtcgatatagagcat
tctgatgctgaagaatggataattgagggtaaaagactgctagcaccattcaattccatt
ccaggacttggggataatgttgctaaacagattgttgctgcgagagcggacaaaccattt
ttatccaaggaagatttggcaaaaagaggacatgtttcagcaagcttgattgaattcatg
acgattaataatgtattgagtgaattacctgatgagaatcagttaagcctattctaa
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integrated database retrieval system
