KEGG   Polaribacter cellanae: J3359_01815
Entry
J3359_01815       CDS       T08224                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pcea  Polaribacter cellanae
Pathway
pcea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J3359_01815 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcea03019]
    J3359_01815 (rny)
Messenger RNA biogenesis [BR:pcea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     J3359_01815 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH-I_KHDC4-BBP DUF5308
Other DBs
NCBI-ProteinID: QTE23034
UniProt: A0A975CQK9
LinkDB
Position
408595..410160
AA seq 521 aa
MDGMLLPIIVGIIGIAIGFIVAKSIEKSKGKKLLNATRKEANSILKEAKVDAESIKKEKI
LQAKEKFIELKSEHEKVILSREKKISDVEKRIRDRESQVASEVDKNKKLNRSLEQKVKDY
DFKLDFLEKKEEDLSKMHKRHIDMLEQISGLSADEAKKELVSSLKDEAKTEAMAFIQTSI
EEAKLTAEQEARKVVLGTIQRVGVEQAVENCVSVFNLESDDVKGRIIGREGRNIRAIEAA
TGVEIIVDDTPDAIILSCFDPIRREIARLSLHKLVTDGRIHPARIEEVVGKTEKQITQEI
IEVGKRTVIDLGIHGLHPELVKAVGRMKYRSSYGQNLLQHSREVANLCGIMAAEMGLNSK
VAKRAGLLHDIGKVPNEESELPHALLGMQWAEKYGEKPDVCNAIGAHHDEIEMKSLISPI
VQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFTGVQKAYAIQAGRELRVMVESTKV
NDTKASELSFNISQKIQNDMTYPGQVKVTVIRETRAVNVAR
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggacggaatgttacttcccattattgtgggaatcataggaattgcaataggttttatc
gttgcaaaatcaatagagaaatctaaaggcaaaaagttattaaatgcaactagaaaagaa
gcaaactctattcttaaagaagccaaagtagatgcagaatcgataaaaaaagaaaagatt
ttacaggcgaaagaaaaatttattgaacttaaatccgagcacgaaaaggtaatattatca
agagaaaagaaaatttctgatgtagaaaagcgaattagagatagagaatcgcaagtagcc
tctgaagtcgataaaaataaaaaactaaatcgctctttagaacaaaaagtaaaagattac
gattttaaactagactttttagagaaaaaagaagaagatttaagtaaaatgcacaaacga
catatagatatgttggagcaaatttctggattatctgcagatgaagctaaaaaagaattg
gtttcttctttaaaagatgaagccaaaacagaagctatggcttttatacaaacgtctatc
gaagaagcaaaattaacagcagaacaagaagcaagaaaagttgttttaggaaccatacaa
agagtaggagtagagcaagctgtagaaaattgtgtttctgtttttaacttagagtcagac
gatgttaaaggaagaattattggtagagaaggtagaaatattagagccattgaagctgca
actggtgtagaaattattgtagatgatactccagatgccattatactttcttgttttgat
ccaattcgtagagaaatagctcgtttatctttacataaattagttacagatggtagaatt
catccagcgagaatcgaagaagttgttggaaaaacagaaaagcaaattacccaagaaatt
atagaagttggtaaaagaacggttatcgatttaggaattcatggtttacatcctgaattg
gtaaaagctgtgggtagaatgaagtacagatcttcttatggacaaaatttactacagcat
tcacgtgaagttgcaaacctatgtggaattatggctgcagaaatgggcttaaactctaaa
gtagcaaaacgtgcaggtttattgcatgatattggtaaagtaccaaatgaagaaagcgaa
ctaccacacgcattactaggaatgcaatgggcagagaaatatggcgaaaagccagacgtt
tgtaatgcaattggagcacaccatgacgaaattgaaatgaagagtttaatctctccaatc
gtgcaagtttgtgatgctatttctggagcaagaccaggagcaagacgtcaagttttagat
tcttacattcaacgtttaaaagatttagaagatattgcatttggttttacaggcgtacaa
aaagcttatgctatacaagcaggtcgtgaattacgagttatggtagaaagcacaaaagta
aacgacaccaaagcatctgaattatcatttaacatttctcagaaaatacaaaatgatatg
acctatcctggacaagtaaaagttacagttattcgagaaacgagggctgtgaatgttgcg
agatag

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