Polaribacter cellanae: J3359_08580
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Entry
J3359_08580 CDS
T08224
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pcea
Polaribacter cellanae
Brite
KEGG Orthology (KO) [BR:
pcea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcea01011
]
J3359_08580
Enzymes [BR:
pcea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
J3359_08580
Peptidoglycan biosynthesis and degradation proteins [BR:
pcea01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
J3359_08580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
NES_C_h
Motif
Other DBs
NCBI-ProteinID:
QTE24299
UniProt:
A0A975H8P8
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Position
complement(1924363..1925844)
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AA seq
493 aa
AA seq
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MKKLIIFLLFSATVFAQENDSIPQKITQADLFSDYDIVLIDSLLMNSKYKSPLYETAIYI
LKDTEKKDVSSVELSTEILKERLQKIDAKTPFHLAYNPALEKVIKSYLKYRKKYYPALMA
KAEYYFPMFEKYLDQYDIPLEMKYLAIVESALDPTAKSRVGATGLWQFMYGTGIQYKLKV
SSYVDERQDPLKSTIAACQYLSDLFNIFGDWDLALAAYNSGPGNVAKAIKRSGGYRNYWN
IRPFLPTETASYVPAFYATMYLFEYQKEHELIADAPQIRHFETDTIHVKKTITFDQVSET
TGISSELIQLLNPSYKLDVIPFVEGKNYSITLPRKNTFQFLDKEQEIYALAETDAAKREK
PLPKYFEMDKRIRYKVRSGDFLGKIANKFGVRVSDIKRWNRLKTSRLKIGQRLSIYPKKL
AIAKDVVNKSSKKVASKNYRKGDFETYTVKKGDSLWIISRKYKNVSIDQIKKWNNIWGVK
SLKPGTKLKIYKS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaattatatttttactgttctctgcaactgtttttgcacaagaaaacgac
tctattcctcaaaaaataactcaggcagatttattttccgactacgatattgtgttgatt
gatagtttattaatgaactctaaatacaaatctccattatacgaaacagcaatttatatt
cttaaagataccgaaaaaaaagatgtttcttctgtggaattatctacagagattttaaaa
gaaagacttcaaaaaatcgatgcaaaaacgccgtttcatttagcatacaatcctgcttta
gaaaaagtaataaaatcgtatttaaaatatcgaaaaaaatattatccagcattaatggca
aaagcggaatattattttccaatgttcgaaaagtatttagatcaatacgatattccatta
gaaatgaaatatttagcaattgtagaatctgctttagatccaactgcaaaatcgagagtt
ggtgcaacaggattgtggcaatttatgtatggtactggaatacagtataaattaaaagta
agttcttatgtagatgagcgccaagatccattaaaatctacgattgctgcttgccaatat
ttgtctgatttattcaacatttttggtgattgggatttggcattggcagcctataattca
ggtcctggaaatgtcgcaaaagccataaaacgttctggaggttaccgaaattattggaat
attcgtccgtttttaccaacagaaacagctagttatgtacctgctttttatgcaactatg
tatttgtttgaatatcaaaaagaacacgaattaattgcagatgcacctcaaattcgccat
ttcgaaacagatactattcatgttaaaaaaacaattactttcgatcaagtttcggaaact
actggaataagttcagaattaattcaattattaaatccgtcttataaattagacgtaatt
ccatttgtagaaggaaaaaattattcaattaccttaccaagaaaaaatacatttcaattt
ttggataaggagcaagaaatttatgctttggcagaaacagatgctgctaaaagagaaaaa
ccacttccaaaatatttcgagatggataaaagaatccgttataaagttcgaagtggagat
tttttaggaaaaattgccaataaatttggagtacgagtaagcgatataaaaagatggaat
cgtctaaaaacaagtcgattaaaaataggacaaagattaagtatttatcctaaaaagtta
gcaatagcaaaagatgttgtaaataaatcttcaaaaaaagttgcttcaaaaaactataga
aaaggagattttgaaacctatacagttaaaaaaggagactctctatggataatttctaga
aaatataaaaatgtttctatcgaccaaattaaaaagtggaacaatatttggggggttaaa
agtttaaaacctggaacaaaacttaaaatctataaaagttaa
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