Polaribacter cellanae: J3359_12755
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Entry
J3359_12755 CDS
T08224
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pcea
Polaribacter cellanae
Pathway
pcea02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcea00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J3359_12755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcea03021
]
J3359_12755
Transcription machinery [BR:
pcea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J3359_12755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
GerE
HTH_28
DnaD_N
RBD_LARS1
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
QTE21686
UniProt:
A0A975CR49
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All DBs
Position
complement(2837213..2838076)
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AA seq
287 aa
AA seq
DB search
MRQLKIVKQVTNRDAKSLEKYFQEISKIGLITADEEVELALKIKKGDSRALDALVSANLR
FVVSVAKQYQGQGLKLSDLINEGNLGLVKAAKRFDETRGFKFISYAVWWIRQSIMSALAE
QSRIVRLPLNKIGSISKIKKVYARLEQNEQRFPTNKEIAKQLDMTESEVEQSLKNSGRHV
SMDAPFKEGEDSNLYNVLQHDESPRPDKNLMNQSLSIEIDRALDTLSLKEARVIKMFYGI
GNETASSLSEIGEKFDLSRERVRQVKQRALNRLKSKSKGHMLKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattgtaaagcaagtaaccaatcgtgacgcaaaatctttggaaaaa
tattttcaagaaattagtaaaatcgggttaattactgcagatgaagaagtagaattggct
ttgaaaataaaaaaaggagattctagagctttggatgcacttgtgagtgcaaatttaagg
tttgttgtttctgttgccaaacaatatcaaggacaaggtttaaaattgtctgacttaata
aatgaaggaaatttaggtttggtaaaagcggcaaaacgctttgatgaaaccagaggtttt
aaatttatttcttatgcagtttggtggattcgtcaatcgataatgtctgcacttgcagaa
caatctcgaattgtacgtttacctttaaacaaaattggaagcattagtaaaataaagaag
gtttatgcaagattagagcaaaacgaacaacgttttccaacaaataaagaaattgcaaaa
cagttagatatgactgaaagtgaagttgagcaatctctaaaaaattctggaagacacgtt
tctatggacgctccatttaaagaaggcgaagattctaatctatacaacgttttacagcat
gatgaatctccaagaccagataagaatttaatgaaccaatctttatcgatagaaattgat
agagctttagatactttatctttaaaagaagcaagagttattaaaatgttttacggaatt
ggaaacgaaactgcttcgagtttatcggaaattggagaaaaattcgatttatctagagaa
cgcgttcgtcaagtaaaacaacgcgctttaaatcgtttaaaatcgaaatctaaaggacat
atgctaaaaacctatttaggatag
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