Paenibacillus cellulosilyticus: HUB94_01725
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Entry
HUB94_01725 CDS
T07813
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pcel
Paenibacillus cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_01725 (addB)
Enzymes [BR:
pcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUB94_01725 (addB)
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HUB94_01725 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF6894
Motif
Other DBs
NCBI-ProteinID:
QKS43218
LinkDB
All DBs
Position
unnamed1:complement(363783..367397)
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AA seq
1204 aa
AA seq
DB search
MALRFVLGRSGAGKTRYCIDEIRAKLRVEPDGPPLIMLVPEQATFQNEYELLRESTRPGT
IRAQAMSFRRLAFRVMQETGGTALVPIDENGKNMLLYKLMHRLAPELKLFEGAGAQPGFI
ERLGELLTEWKRYGVDGGMLAEVSNAHPAADAAASPLLSNKMHDLKLLYQALELETAHLY
ADAEDYLTYLARGFALSPAVAGAEIWIDGFHGFTPKEYESLAAIIGASANVTIALTLDRP
YEAGEQPHELELFHPTAETYIKLRELAELNDIQINETITLSSPTLPRFEGRAALAHAERS
YATRRPMPASISTEAMFDPEQPAGEVSLHAAPNRRTEAEAAVRDMVRRAREEGMRWRDMA
VMVRNATDYTDYLTELMHDYGIPYFLDQKRSASHHPLVEFIRSALETVLHGWSYDAVCRC
MKTELLFPDSSESRLTRESFDLLENYALAAGIDGWRWCEKKSWKPLVRESLDNEEAAEAS
KSELARFQVVMEAREAIVAPLQRFGDALRSAKDVRSMCMALYRLLERADAADRLERWSRA
DAGAGRVRQSRTHRQLWDGVMSLLDQLVEMTGDEQMTPELFAGMIETGLDSLKLASVPPS
LDQVLIGSVDRTRSGEVKVCYVLGANDGVLPKRMQEDGILTEQERDTLADKGLPLAPSVR
RKLLDERFMIYNAIAAPSRHLWISYAMADEEGKSLHPSELIRHLRVMFPLLRERTLSSEP
IAEMSRDEQLAFVVRPAAVLPYLNAQLRAWRQGAGIDDVWWDIFNWFAIRPQWQEPLRQR
TAALGYTNDVQPLDPETARQLYGERLRASVSRMERFVSCPFQHFAVYGLRLEERPIYRLE
APDVGQLFHAALSRIADRFGKRWGAVTEQQAVDVVSEAVEAIAPRLQSEILLSSGRHRYM
LVKLKAIITQAALMLADHARRAAFHPVGLEVDFGPEGHLPSLIIPTPDGGEVELVGRIDR
VDAAETDEGLLLRVMDYKSSSTSLRMEEVAFGLSLQMLAYLDVLLTHGAAWLGREVKPAG
VLYFHVHNPLLSASGGLNQEEARKQRLKKFKPKGLLVADENIVRLMDGELESGHSEVLPL
AIKKDGSFYSTSSVLAEESWDSLRVSVRQAIGRIGSAIGCGAVSISPYRMGGKSPCTFCS
YKPVCQFDPLYDGNEYAKLPKLGRDEVWSVLGHQQGEPNEHVRETAAAAEAFMTRGNGND
RRNV
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgatttgtgctcggccgctccggggcggggaaaacccggtactgcattgac
gaaattcgcgccaagctgcgggtggagcccgatggtccgccgcttattatgctggtgcct
gaacaggcgacgttccagaacgaatacgagctgctgcgagaaagcacgagaccgggcacg
atacgtgcgcaggcgatgagcttccgccgtcttgcttttcgcgtaatgcaggagactggc
ggcactgcgctcgtcccgatagacgagaacggcaagaatatgctgctctacaagctgatg
catcgactggcacctgaactcaagttgttcgaaggggcaggcgctcagcctggcttcatt
gaaaggctcggcgaactgcttaccgagtggaagcgttatggcgtggacggcggaatgctg
gctgaagtatctaacgctcatccagctgctgacgctgcagcttcgccgctgctctccaac
aaaatgcatgacctgaagctgctgtaccaagcgctcgaattggaaacggcgcatctgtat
gccgatgccgaagactatttaacctatctcgcccgcggcttcgcacttagcccagccgtt
gcaggtgcagagatttggatcgacggcttccacggctttacgccgaaggaatacgagtcg
ctcgctgcgattatcggcgcttccgccaatgtgacgattgcgctgacgctcgaccgtcct
tacgaagctggcgagcagccgcatgagctggagctgttccatccgaccgcagagacgtac
atcaaactgcgtgaacttgcggagttaaacgatatacaaatcaacgagacgattacgttg
agcagcccgacgctgccgagatttgaaggcagagcagcgctggctcatgctgagcgaagc
tacgctacccgcagaccgatgcctgcatctataagcactgaggcgatgttcgaccccgag
cagccagctggcgaagtttccttgcacgccgctcctaaccgtaggacggaagcagaggct
gcagtacgcgatatggttcgccgtgcgcgtgaagagggcatgcgttggcgcgatatggcc
gtcatggtgcgcaatgcaacggattacaccgattatcttaccgagttgatgcacgattac
ggcattccatacttccttgaccagaaacgatcggcatcgcatcatccgctggtcgagttt
attcgttcggcgctggaaaccgtcctgcatggctggagctacgacgccgtatgccgctgc
atgaagacggagctgttgttcccggatagcagtgaatcccgattgacccgtgaatcgttc
gacctgctcgaaaattacgctctcgccgctggtatcgacggctggcgttggtgtgaaaag
aaaagctggaagccgctcgtccgcgagtccctcgacaacgaagaagcggcggaagcgagc
aagagcgagcttgctcgcttccaagttgtaatggaggcgcgggaagcaattgttgcgcca
ctccagcggttcggcgatgcgctccgcagtgcgaaggatgtccgctccatgtgcatggcg
ctgtaccggctgcttgagcgagctgacgctgctgaccgtctcgagcgctggagccgcgcg
gatgcaggagcaggccgcgtacggcagtcgcgcactcaccgccagctgtgggatggcgtc
atgtcgctgctcgatcagctcgtcgaaatgacgggcgacgaacagatgacgcctgagctc
tttgcaggcatgatcgagacaggtcttgacagcttgaagcttgcctccgttcctccatcg
cttgatcaagtgctgatcggcagcgtcgatcgtacgcgttcaggcgaggtaaaggtttgc
tatgtacttggggctaacgatggtgttctcccgaagcgaatgcaggaggatggcatcttg
acggagcaagaacgtgacacattggcggataaagggcttccgctcgcgccaagcgttcga
cggaaactgcttgatgagcgcttcatgatttacaacgcgattgctgcaccaagccggcac
ttatggataagctatgcgatggcagatgaagaaggcaagagcttgcatccatcggagctg
attcggcatctgcgcgtcatgttcccacttctgcgagaacggacgcttagcagtgagcca
atcgcggagatgagtcgtgacgagcagctggcatttgtcgtacgccctgcagcggtgctt
ccatacctaaacgcacaattgcgtgcatggcggcaaggtgcgggcattgacgacgtctgg
tgggatattttcaactggttcgccattcggccgcagtggcaggagccgctgcgccagcgg
acggcggcgcttggttacacgaatgatgtgcagccgcttgatccagagacagcacgccag
ctgtatggcgagcgtctacgggcaagcgtgtcgcggatggaacggttcgtatcgtgtccg
ttccagcattttgccgtctatggcctgcgtcttgaggaacgtccgatttatcggcttgaa
gcgccggatgtcgggcagctgttccacgctgcactcagccgtatcgcagatcgtttcggc
aagcgctggggcgctgtcacagagcagcaggctgtcgacgttgtgtccgaggcggtcgag
gcgattgcgccgcggctgcaatcggagatactgcttagcagcggcaggcaccggtatatg
ctggtcaagctgaaggccatcattacgcaagcggctctcatgcttgccgatcatgcgagg
cgggcagcgttccatccggtcggcttagaggttgattttggaccggaggggcatttgcca
tcgcttattattccgacgccagatggcggcgaggtggagcttgtcggacgaatcgaccgc
gtcgatgcggcagagacggacgaagggctgctcctgcgcgtgatggactacaaatccagc
tcgaccagcctgaggatggaagaggtggcgttcgggctgtcgctccaaatgctcgcatac
ctcgatgtgctgctgacgcacggtgcggcgtggctgggaagagaagtgaagcccgcgggc
gtgctatatttccatgttcataatccactgcttagtgcatcaggcggtttgaatcaagag
gaggcacggaagcagcggctgaagaaatttaagcccaagggactgcttgttgccgatgag
aacatcgttcggcttatggacggcgagctggaatccgggcattcggaagtgctgccgctt
gcaattaagaaggatggatcgttctacagcacctcctccgtacttgcggaggaaagctgg
gattcgcttcgcgtatcggtgcggcaggcaatcggacgaatcggtagtgctatcggctgt
ggtgcggtctcaatctcgccttatcggatgggcgggaagtcgccatgtacgttctgttcg
tacaagccggtctgccaattcgacccgctgtatgatggcaacgagtatgcgaagctgccg
aagcttggccgagatgaggtatggtccgtactcgggcatcagcaaggtgagccgaacgag
catgtccgtgaaacggcagccgctgcagaggcattcatgacgagggggaacgggaatgac
cggcgtaacgtttag
DBGET
integrated database retrieval system
