Paenibacillus cellulosilyticus: HUB94_03190
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Entry
HUB94_03190 CDS
T07813
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUB94_03190 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_03190 (xth)
Enzymes [BR:
pcel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HUB94_03190 (xth)
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HUB94_03190 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QKS43550
LinkDB
All DBs
Position
complement(52054..52830)
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AA seq
258 aa
AA seq
DB search
MKLVSWNVNGLRACVTKGFGDYFREADADIFCVQETKLQEGQIELDLGEEYGQFWNYAVK
KGYSGTAVFTRIKPITVRYGMEEDSENEGRILTLEFDSFYLVNVYTPNAKRDLSRLDYRM
EWEERFRTYLTELDARKPVIVCGDLNVAHQEIDIKNAKSNIGNSGFTDEERGKFSTLLEA
GFIDSFRHQHPERGDTFSWWSFMPKVRERNIGWRIDYFLVSARLAPSIVEAEIDCHIFGS
DHCPVRLELADTLHNGVR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtatcttggaatgtgaacggtctgcgcgcctgcgtgaccaaaggcttcggc
gattatttccgcgaggctgacgccgatattttctgcgtgcaggaaacaaagctgcaagaa
ggacagatcgagctggatctcggcgaagaatacggacagttctggaactatgccgtgaaa
aaaggctactccggcaccgctgtattcacgcggatcaagccaatcaccgtacgttacggt
atggaagaggacagcgagaacgagggacgaatactgactctcgaattcgatagcttctat
ctcgtgaacgtctatacgccaaatgcgaagcgtgacctgtcgcggcttgactaccggatg
gaatgggaggagcgattccgtacctacctgacagagctcgacgcacggaagcctgttatc
gtatgcggagatttgaacgtcgcccatcaagaaatcgacattaagaacgcgaagtcgaac
atcggcaactccggctttacggacgaggagcgcggaaagttctcgacactgctcgaagct
ggcttcatcgattcgttccgtcatcagcatcccgagcgtggcgatacgtttagctggtgg
tccttcatgccgaaggtgcgcgagcggaatatcggctggcgcatcgactattttctcgta
tcggctagacttgcccctagcatcgtagaagctgagatcgactgtcacatttttggcagc
gaccactgcccagtgaggcttgagctagcggataccctgcataatggagtgcggtga
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