Paenibacillus cellulosilyticus: HUB94_07330
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Entry
HUB94_07330 CDS
T07813
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pcel
Paenibacillus cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcel03021
]
HUB94_07330
Transcription machinery [BR:
pcel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUB94_07330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_38
DUF1492
Trp_repressor
GerE
HTH_23
HTH_10
HTH_28
HTH_Tnp_ISL3
HTH_50
Sigma70_ECF
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QKS46424
LinkDB
All DBs
Position
complement(1105659..1106432)
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AA seq
257 aa
AA seq
DB search
MTFPPSRQLHDSAARIAEYQRNPTNEAATILIEHHAPIVRMAASKIARNRPDLYEDLVQV
GQMSLLRLYRQYDPAVGVQFEPYAMKSIIGHMKNYLRDKSWYIQVPRRIKEKGISVQQTI
DELTVRLERSPKVEEIAAHMELTVEETLEILGGRDLYHYVSLDTPISEEDSTTTLGELLH
SQLDEYEHIDKKLDIEAAMAQLKPEERQVLKLVFEDGVPQRLIAEQLGVSQMSISRIQRR
AIEKLRRSLTENHHPDS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgacattccctccgtcccggcagcttcatgatagcgccgcgcggattgcggagtatcag
aggaatccgaccaatgaagctgcaacgatattaattgaacatcatgccccgatcgtacga
atggctgccagcaaaattgcacgcaaccgtccagacctgtacgaggatctcgtccaagtc
ggccaaatgtcgctcctgcgactgtatcggcaatacgatccagcggtcggtgtgcaattc
gagccttatgcaatgaagagcattatcggtcatatgaagaattatcttagggacaaatcc
tggtatatccaggtgccccgccgcattaaagaaaaaggaatctccgtccaacagacgatt
gatgaactaaccgtccggctggagcgatctcctaaggttgaagaaattgcagcccatatg
gagctcactgtcgaggagacattggaaattctcggcggacgtgatctgtaccattacgta
tcgctggatacgccaatcagcgaagaggacagcacgacgacgctcggagagctgctgcac
tcccagctagatgaatacgagcatatcgataagaagctcgatatcgaagcagcaatggcc
caacttaagcccgaagaacggcaggtgctgaagctcgtgttcgaagacggtgtccctcaa
cgcctcattgcggagcagcttggcgtctctcaaatgagcatctcgcgcatccagcgcaga
gcgattgagaagctccgtcgcagcttaacggaaaaccatcatcccgattcatga
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