Paenibacillus cellulosilyticus: HUB94_10050
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Entry
HUB94_10050 CDS
T07813
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HUB94_10050 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcel02000
]
HUB94_10050 (lsa)
01504 Antimicrobial resistance genes [BR:
pcel01504
]
HUB94_10050 (lsa)
Transporters [BR:
pcel02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HUB94_10050 (lsa)
Antimicrobial resistance genes [BR:
pcel01504
]
Gene variants
Macrolide resistance genes
Transporters
HUB94_10050 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
MMR_HSR1
KAP_NTPase
DUF5906
AAA
NACHT
AAA_23
Dynamin_N
AAA_16
DUF4024
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QKS44713
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All DBs
Position
1794981..1796462
Genome browser
AA seq
493 aa
AA seq
DB search
MSLIRVTNLTFAYDGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLNLLLGKHEYSGT
ISANVSFDYFPFHVEDKAMNTIDVVADIDPDYEHWQLLRELSLLNVSDDVLYRPFESLSN
GEQTKVLLAALFLKENHFLLIDEPTNHLDIHARKLVSDYLKGKSGFILVSHDRAFLDNCV
DHVLSINKTSIEIQKGNFTDWRETKQRQDNFELAENDKLKKDIKRLSEAAQRTSNWSHEV
EKTKNGTRNSGSKVDKGYIGHKAAKMMKRSKSIEQRQQSQIEERSRLLNNVESSESLKIS
QLAYHKQQLIELDRVSIHYGEKKVCRDISFTVEQGDRIVLSGPNGSGKSSLLKLICGEDI
PYSGILRIGSQLKISYVSQDTSYLHGNLSDFARNSGIDESLFKSILRKFDFSRLQFEKDI
ASFSGGQKKKVLIAKSLCEKVHLHVWDEPLNFIDVISRMQIEEVLLEHSPTILFVEHDSE
FCKHIATKTVELK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgatcagggtaacgaatctgacgtttgcttatgacggcagttatgacaacatt
tttgagaatgtaagctttcaaattgataccgactggaaattaggctttacagggagaaac
ggccgaggcaagaccacgtttcttaatctgctgctcggtaagcacgaatacagcggaacg
atttcggccaacgtgagttttgattactttccattccatgtggaagacaaagcgatgaat
accatcgacgttgtcgccgacatcgatccggactatgagcactggcagctgcttcgcgag
ttatcgctgttgaatgtgtcggatgatgtgttatatcggccattcgaatcgctgtccaat
ggagaacaaacgaaggtgctgctggcggctctgtttttgaaggaaaaccattttttgctc
attgatgaaccgaccaaccatctggatatccatgctcggaagctggtcagcgattatttg
aaaggcaaaagcggttttatattggtgtcgcacgaccgggcgtttctagacaactgcgtg
gatcatgttctgtcgatcaacaagacgagtatcgaaatccagaaaggaaattttacggac
tggcgggagaccaaacaacggcaggataactttgagctggccgagaacgacaaactgaag
aaggacattaagcgtctatcggaagcagcccagcggacgagtaactggtcgcatgaagtg
gagaaaacgaagaacggcacccgcaactccggctctaaggtcgataaagggtacattggt
cacaaggctgccaaaatgatgaagagatccaaatcgatcgaacaaaggcagcaatcccag
atcgaggaaagatcccggctgctcaacaacgttgaaagctcagagagtttgaaaatttct
cagctagcgtatcacaaacagcaattaatcgagctcgaccgcgtttcgattcattatggc
gagaagaaagtttgccgcgacataagctttactgtcgagcaaggggaccgcattgtgctc
tccggcccgaacggctcgggaaaatccagcttgctcaaattgatctgcggtgaggatatt
ccttattccggaattctccgaattgggagccagttgaaaatatcttacgtttcgcaggac
acctcatacttgcatggcaatttgtcggacttcgccagaaacagtggaattgatgaaagc
ttattcaaatcgatattaaggaaattcgatttttcgcgtttacaattcgagaaggacatt
gcctcatttagcggcggtcagaagaagaaggtgctgatcgcgaaaagcctctgcgagaag
gttcatttgcatgtttgggacgaaccgctcaattttatcgacgttatttcccggatgcaa
atcgaagaagtgctgctggagcattctccaacgatcctctttgtagagcatgacagcgag
ttttgcaagcatatcgcaacaaaaacggtggaattgaaatag
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