Paenibacillus cellulosilyticus: HUB94_11270
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Entry
HUB94_11270 CDS
T07813
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUB94_11270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcel03019
]
HUB94_11270
03009 Ribosome biogenesis [BR:
pcel03009
]
HUB94_11270
Enzymes [BR:
pcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUB94_11270
Messenger RNA biogenesis [BR:
pcel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUB94_11270
Ribosome biogenesis [BR:
pcel03009
]
Prokaryotic type
rRNA helicases
HUB94_11270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
DUF4391
AAA_22
UvrD-helicase
SLFN-g3_helicase
DUF5119
Motif
Other DBs
NCBI-ProteinID:
QKS44925
LinkDB
All DBs
Position
complement(2084228..2086078)
Genome browser
AA seq
616 aa
AA seq
DB search
MATTFATLGVSQELTSVLTSYGITVPTPVQTKAIPLALKGVDVIVQAQTGTGKTFAFALP
LLSRIDTSKNQTQALVLTPTRELALQITAEMAKLAPAAGASVLAAYGGQDVESQIRKLAN
RQPHIIVATPGRLLDHLRRETVSLGKVRMLVLDEADQMLHMGFLTDVESIISQMPRQNRQ
TMLFSATIPDQIRRLGSEYMNNPEDVRITPERVTVDTIKQIAIETTDRRKEDTLIELIGR
YRPYLAVVFCRTKVRAKKLNEALQERGIESDELHGDLSQAKREQVMKRFRDARLQVLVAT
DVAARGLDVEGVTHVFNYDLPMDAESYVHRIGRTGRAGNNGMSVTLMTSRDAAAVAHIER
ALNTRIERRDDSAVARGDLPIRVKPDKQGRRAQEERESASRGGQSGGPRGRGRANGADQR
SGGAGGRGGAGGRGGAAGRGESAPGRGGRGESANGRGRGAAKAGSWSAVPASGRGGASRS
GGSAAGGKRGFDAEAWNEPSPTLGRGGSAPRGGNAPAGRGGGSSAPRSGSYAGGSVLSNK
RGADANANPWESAPASGRGGAGAAGGRRGNSEGRGGNAGGRGRSDAPRGGGGGRGRSEGG
GRSGGRSNNGGGRRGR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcaactacgttcgcaacacttggcgtctcgcaagagctgacgagtgttctcacatca
tatgggattacggtgcctacgccggttcagacgaaagcaatcccgctcgcgctcaaaggc
gtggacgtgatcgtacaagcgcagaccggtacgggcaaaacatttgcgttcgcgcttccg
ctgctttcccgcatcgacacgagcaagaaccaaacgcaagcacttgtgctcacgccaacg
cgtgagctggcgctgcagattacagcagagatggcgaagctcgcccctgctgcaggtgca
agcgtcctcgctgcctacggcgggcaggacgtggaatcccaaatccgcaagctggctaac
cgccagccgcatattattgtagcaacgcctggacgtctgctcgatcacctgcgccgtgag
acggtatcgctaggcaaagtccgcatgctcgtcctcgacgaagcggatcaaatgctgcac
atgggcttccttacggatgttgaatcgatcatctcgcagatgcctagacagaatcgtcag
acgatgctgttctccgcgacgataccagaccagatccgcaggcttggttctgaatatatg
aacaacccggaggatgtacgcatcacgccggaacgtgtaacggttgatacgatcaagcag
atcgcgattgagacgacggatcgccgcaaggaagatacgctcatcgagctgatcggacgc
taccgtccgtacctcgcggtcgtattctgccggacgaaggttcgtgcaaagaagctgaac
gaagcgctgcaagaacgtggcatcgagagtgatgaattgcatggtgacctgtcgcaggcg
aagcgcgagcaggttatgaaacggttccgcgatgctcgcctccaagtcctcgttgcgaca
gacgttgctgcgcgcggtctcgacgtcgagggcgtcacgcacgtattcaactacgatctg
ccgatggatgcggaatcgtatgttcaccgtattggccggacgggccgtgccggcaacaac
ggcatgtccgttacgcttatgacgtcacgcgatgcagcagctgtagctcacatcgagcgc
gcgctcaacacaagaattgaacgccgtgacgattcggctgttgcacgcggcgatctgccg
attcgcgttaagcccgacaagcaaggccgccgagctcaggaagaacgagaatcggcaagc
cgcggcggtcaatccggcggtccacgcggcagaggcagagcgaacggtgcagaccaacgc
tccggcggtgctggcggtcgtggcggtgctggcggtcgtggcggcgcagcaggacgcggc
gaatccgcgccaggtcgcggtggtcgtggcgaatccgctaatggccgcggtcgcggcgca
gcgaaagccggctcttggagcgcagtacccgctagtggacgcggcggcgcttcgcgctcc
ggcggctcagcagctggcggcaagcgcggcttcgacgccgaggcttggaacgaaccatca
ccgacactgggccgtggcggctccgctccgcgcggcggcaatgcgcctgcaggacgcggt
ggcggttcatccgcaccacgcagtggttcatacgcaggtggcagtgttctttcgaataag
cgcggtgctgatgcgaatgcgaatccatgggaatccgctccagcgagcggccgtggcgga
gcaggcgcagcaggcggcaggcgcggcaattcagagggacgcggcggcaatgccggcggt
cgtggacgttccgacgcaccacgcggtggcggcggtggccgcggtcgttctgaaggcggc
ggtcgcagcggcggccgatccaataacggaggcggacggcgcggacggtaa
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