Paenibacillus cellulosilyticus: HUB94_19280
Help
Entry
HUB94_19280 CDS
T07813
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03410
Base excision repair
pcel03430
Mismatch repair
pcel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUB94_19280 (recJ)
03430 Mismatch repair
HUB94_19280 (recJ)
03440 Homologous recombination
HUB94_19280 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_19280 (recJ)
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HUB94_19280 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HUB94_19280 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUB94_19280 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QKS46652
LinkDB
All DBs
Position
unnamed4:complement(13999..16392)
Genome browser
AA seq
797 aa
AA seq
DB search
MIPSKTRWSEPEWTEDRDQAASSLSKLLGIPTIVARLLVGRGIETADEAEAFLQGGKELL
HDPYELHGMTAAVERIRHAIASGERIRIYGDYDADGVSSTSLMIHLLHRLNANFDYYIPH
RTREGYGMNHAAVDLAVEAGVKLFITVDTGISAVDEVAYANSLGIDVVVTDHHEPPAILP
EAYAIVNPKQEACTYPYSSLAGVGVAFKLATALLGEPPLDLTDIVALGTIADVMPLTGEN
RVLVKFGLQTMAKNMRPGFRSLAEIAGVDIQKVTSTNVAFAMAPRINASGRIDHANGAVE
LLTTPDQESADAMAARLDTLNRERQGIVEVIVEQAKQQWADKCQAAAEAGAPEPSVIVVA
GEGWNAGVIGIVASKLLDRHYKPTVVLGIDAETGMCKGSARSIEGFDLHAALNECAELFE
HFGGHQAAAGMSLHRDRLEAFEASLIQSANAWLKPEDWIPRTAVDICCTASDVTLETIDQ
LGLLEPFGAGNPAPRFLLTDQPVTDKRTMGKDHRHLRLTVGSGIKLEAVGFGFGELAERM
AHGSSVDLVGELAVNEWNGNRKPQLFIQDLRVEKIQLFDWRDEREPYAALRRLLETASRS
GRRTIILTSEEAVRETAAACARTDAMAEHYYIGHYEDSLLDSLPFVEAIVYGLPPSADDL
QSILAKFERLQSVHLLYPKRANERNDRAGKPSFPERNDFGMAYQLLRRLGKAQEQGLAER
LSGQIGWPPSVAAMMLDVFEELAFIQRSSGVVTVAETPVKAELSTSQAYIKAQRRVETNG
ILFASTEQLFHFITRGS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgattccatcgaaaacacggtggtcggagccggaatggacggaagaccgcgatcaggcg
gcgagcagcctatcgaagctgctcggcattcctacgatcgttgctcgtttgctggttgga
cgaggcatcgagacagcggatgaagcggaagcttttcttcaaggcggcaaagagctgctc
cacgatccctatgagctgcacggtatgacagcagccgtggagcgaattcgtcatgcaatt
gcaagcggagaacgtatccgtatttacggtgactacgatgcagacggggtttccagcacg
tcgcttatgatacatttgctccatcgactaaatgccaactttgattactatattccacac
cggacacgtgaaggctacggaatgaaccatgcggctgtagatcttgcagttgaagcaggg
gtaaagctgttcatcacagtcgatactggaattagtgctgtcgatgaggtcgcttatgcg
aatagtttaggcatcgatgtagttgtcaccgatcatcatgaaccgccagctatactgccg
gaagcgtatgcgatcgtcaacccgaaacaagaagcttgcacgtatccctactcgtctctt
gcgggtgttggtgttgcattcaagcttgcaacggcgctgcttggcgaaccgccgcttgat
ttgacggatatcgtagcgctcggcacgatcgcagacgtgatgccgctcacgggagagaat
cgtgtactcgtcaagttcggactgcagacgatggcgaagaacatgcgcccaggttttcgc
tcgctagcagagatcgctggcgtcgatattcagaaagtgacatcgacgaatgtagcgttt
gccatggcgccgcgcattaatgcaagcgggcggatcgatcatgcgaacggtgcagttgag
ctgctgacaacaccggatcaagaatcagctgatgccatggcggcaaggctggatacgctt
aatcgagaacgtcaaggtatcgtagaagttattgtcgagcaagcgaagcagcagtgggcg
gataagtgccaagcggcggcagaggctggggcaccggaaccgtctgtcattgttgtggca
ggtgaaggctggaatgccggcgttatcggtattgtcgcctccaagctgcttgatcgacat
tacaagccgaccgttgtgcttggcatcgatgctgagactgggatgtgcaaaggttctgcg
cgttctattgaaggcttcgacctgcatgctgcgttgaacgaatgcgcggagctgtttgaa
cattttggcggccatcaggctgcggcggggatgagtctgcatcgcgatcgtctcgaagca
tttgaggcgagtcttattcaatctgccaatgcatggcttaagccggaggattggattccg
cggacggctgtagatatttgctgtacagcgtcggatgttacgctggaaacaatcgatcag
ttgggtctgttggagcccttcggtgcgggaaatccggctccgcggtttctgttgactgat
caacccgttacggacaagcgtacgatgggcaaggatcaccgccatttgaggcttactgtc
ggcagcggaataaagcttgaagccgttggtttcggcttcggcgagttagcggaacgtatg
gcgcatggttcatccgttgatctggttggcgagcttgctgtgaatgaatggaacggcaat
cggaagccgcagctgttcatacaagatttaagagtggagaaaatccagctattcgattgg
cgtgatgaacgagaaccgtatgcggcgcttcggcgcctgctggagacagcaagccgaagc
ggcagacgaacgattatactcacgagtgaagaagcggttcgcgagacggcggcagcgtgt
gcaagaaccgatgcaatggcggagcattattatattgggcattatgaagattcattattg
gattctctgccattcgtagaagctattgtttacggcttaccgccatctgctgatgacctg
cagtcgattctcgccaaattcgaacgattacagtccgttcatctgctttatccgaagcgg
gccaatgaacggaatgatagagctgggaagccgagcttcccagagcggaatgacttcggt
atggcttatcagctgctcaggcggcttggcaaggcacaggagcaagggctggctgagcgg
ctctctggacaaattggctggccgccttccgtggcggcgatgatgctggatgtgttcgag
gagctggcctttattcaacgcagctctggcgtagtaacagtcgcggagacgccggttaag
gcggagctgtctacctcgcaagcgtatatcaaagcgcagcgccgggtagagacaaatggc
attttattcgcatcgaccgagcaattatttcattttataacgagaggaagttaa
DBGET
integrated database retrieval system
