Paenibacillus cellulosilyticus: HUB94_19775
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Entry
HUB94_19775 CDS
T07813
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUB94_19775 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcel03019
]
HUB94_19775 (recQ)
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_19775 (recQ)
Enzymes [BR:
pcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUB94_19775 (recQ)
Messenger RNA biogenesis [BR:
pcel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUB94_19775 (recQ)
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HUB94_19775 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
HHH
GerE
HHH_5
PGC7_Stella
Motif
Other DBs
NCBI-ProteinID:
QKS46745
LinkDB
All DBs
Position
unnamed4:complement(120114..122318)
Genome browser
AA seq
734 aa
AA seq
DB search
MQEARNLLKQVYGYDTFRKGQEAIISGIMEGRDSLAILPTGGGKSVCYQIPALLMDGTTL
VVSPLISLMKDQVDALNRLGIKAAYLNSSMSAVEYREVMRQAFMGEYKLLYVAPERLDAP
MFASLSEQMHIPLIAIDEAHCVSQWGHDFRPSYRQLAGWIARMNNRPLVAAFTATATEEV
ARDIASMLGLHDPSIHVSGFARDNLSLSVVSGADKPAFLRKFMGERKDQSGIIYAATRKE
TEQVHAVLEKMGIPAGKYHGGLGDVERAEMQEKFRFDDVRVMVATNAFGMGIDKPNVRFV
LHWQMPGDVESYYQEAGRAGRDGEESECILLFEPQDVQVQRFLIDQGTGDGDRKSIQMAK
LHTMMNYSRTQRCLQQFIVEYFGEADVPPCGKCSSCLDKSELIDRTDDALKALSCVARLK
GKFGVTTAAKVLKGSRDKRVLEWGLDKLSTYGLFSRWPEKEISDWLYWLVAEGYLVMSDG
QYPTVSLASGSLPVLEGRERVQQRKRTTVRQASSQAVSSPLFEALREWRRTAAAREKVPP
FMLFFDATLRELADAAPTSREQLLSVKGIGAAKADKYGDDIMSIIRSFAADSPTTNEVPE
LLTVSATVDYTNMDTVDSSSKPASSKKASATTSSDGDGASHVQSLEQFEAGMSMKDIAAA
RGLSEVTIEGHLIRCALEGLSVDWERMLPAVYEAQIMEAVDQVGAEKLKPIKEALPDEIS
YFMIKAALAKRSLQ
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagaagcaagaaacctgctgaagcaggtttacggctatgatacgtttcgtaaaggt
caggaggcgatcattagcggcataatggaaggccgagattcgctggcgattttgccgaca
ggcgggggcaagtcggtctgttatcaaattcctgcgctgcttatggacggcacgacgctg
gtcgtatccccccttatatcgctgatgaaggaccaggtcgatgccctcaatcggcttggt
ataaaggcagcatatcttaacagctcgatgagtgcggttgagtaccgggaagttatgcgt
caagcattcatgggcgagtacaagctgctctatgtagcgccagagagacttgatgcaccg
atgttcgcatcgctgtccgagcagatgcatatcccgcttattgcgatcgatgaagcgcac
tgcgtatcgcagtgggggcatgatttccgtcccagctatcgtcaattggcgggctggatt
gcacggatgaacaatcgcccactggtcgccgcttttacagcaacggctacggaagaggtg
gctcgtgacattgcgagcatgctcggcttacacgaccctagcattcatgtcagtggtttt
gcacgtgataacctgtcgctgtcggttgtaagcggagcggacaagccagcatttctgcgc
aagtttatgggggagcggaaggatcaatcgggcatcatctacgcggctactcgcaaggag
acggagcaggtacatgccgtacttgagaaaatgggcattcccgcaggcaagtaccacggc
gggcttggcgatgtggagcgggcggagatgcaggagaagttccgtttcgacgacgtgcgt
gtcatggttgcaaccaatgcattcggcatgggcatcgataagcccaacgtaagatttgtt
ctgcactggcagatgccaggcgatgttgagtcctactaccaggaagcgggccgtgcaggg
cgtgacggcgaggagagcgaatgcattttgcttttcgagccgcaggacgttcaagtccag
cgtttcctcatcgatcaaggaacaggcgacggcgatcggaagtcgattcaaatggcgaag
ctgcacacgatgatgaactattcgcgaacgcagcgctgcctgcagcagtttatcgttgaa
tatttcggcgaagcggatgttccgccctgcggcaagtgcagcagctgtctcgataagagt
gaattgattgaccgtacagacgacgcgcttaaagcgttatcctgtgtcgcgcgtctgaaa
ggcaaattcggggttactactgctgcgaaggtgttgaagggctcacgcgataaacgagtg
ctggagtgggggctggataagctttctacttatgggctgttctcgcgctggccagagaag
gagatttcggattggctgtactggctcgttgctgagggctatcttgtcatgagtgatggg
cagtatccgaccgtatcactcgcatccggctcattgccggtgctggagggcagggaacgg
gtgcaacagcggaaacggacgacggttcgtcaagcatcgtctcaggctgtcagctcgccg
ttattcgaagcattgcgtgaatggcggagaacggctgcggcacgcgagaaggtaccgcca
ttcatgctgttcttcgatgcaacgctgcgtgagctggcggatgcggcacctacttcacgc
gaacagctgttatccgtcaaagggattggtgcagcgaaggcggataagtacggcgatgat
atcatgtccattattcgttccttcgccgcggacagcccgacaactaatgaggtaccagag
ttgctaactgttagcgcgactgttgattatacgaatatggacactgtggatagcagcagt
aaacctgcatcgagcaagaaggcgtcagcaactacatcttcggatggcgatggcgcaagt
cacgtgcaatctctcgagcagttcgaagcgggcatgagtatgaaggacattgctgctgct
cgtggcctgagcgaggtcacgatagaggggcatttgattcgatgtgcattggaaggactt
tcggtagattgggagcgaatgctgccagcagtttacgaggctcagatcatggaagctgtt
gatcaggttggggcggagaagttgaagccaatcaaggaagcgctgcccgatgagatcagt
tatttcatgatcaaagcagcgcttgccaagcgcagtcttcaataa
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