Paenibacillus cellulosilyticus: HUB94_26260
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Entry
HUB94_26260 CDS
T07813
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUB94_26260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcel03021
]
HUB94_26260
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_26260
Enzymes [BR:
pcel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUB94_26260
Transcription machinery [BR:
pcel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUB94_26260
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUB94_26260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QKS47812
LinkDB
All DBs
Position
unnamed4:complement(1599605..1600549)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELNENGTYGRFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVIEDVTEIILNLKGLSLKIHSDEEKVLEIDAEGEGNVTAGDIRADSDVEI
LNPDLHIATLASGARLHMRVFANRGRGYVPADRNKKEDQPIGVIPIDSIYTPITRVNYSV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHLDLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRMEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagatcgaaaagccgaaaatcgaaaccgtagagctcaatgagaatggcacatat
ggacgttttgtagttgaaccactggagcgcggatacggtacgacgcttgggaattcgctt
cgtcggattcttctctcgtcgctgccaggcgcagctgtgacttcggtacaaatagatggt
gtgcttcatgaattttctacggttcccggtgtgatcgaggacgtaaccgagatcatcctg
aacctgaaaggcctgtcgctcaaaatccactccgacgaagagaaggtgctggagattgat
gcagaaggcgaagggaacgtaacggcgggcgacattcgagcggacagcgatgtcgagatt
ttgaacccagatcttcatatcgcgaccttagcctccggtgcacggctccatatgcgggta
ttcgccaatcgtggacgcgggtacgtacctgcggatcggaataagaaagaagatcaaccg
atcggcgtaattcctattgattcgatctacacgcccattacccgtgtcaattacagcgta
gaaaatactcgtgtcggccaagttactaactatgacaagctcaccttagaggtttggact
gatggaagtattcgaccggaagaggctgttagcctcggcgctaaaattttgaccgagcat
ttggacctgttcgtcggattgaccgatgaagccaaagacgcggaaattatggtcgagaaa
gaagaagataagaaagagaaagtactcgagatgacgatcgaggaactggatctttccgtt
cgttcttacaactgcttgaaacgtgcaggcatcaacactgttcaagagctgatcacgaaa
accgaagaagatatgatgaaggtacgcaacctcggacgcaaatctttggaggaagtacaa
gagaagctagaggaacttggtttgggcctccgcatggaagaatag
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