Paenibacillus cellulosilyticus: HUB94_26730
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Entry
HUB94_26730 CDS
T07813
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUB94_26730 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_26730 (uvrB)
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUB94_26730 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HUB94_26730 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_22
AAA_16
AAA_25
AAA_5
AAA_7
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QKS47896
LinkDB
All DBs
Position
unnamed4:complement(1692708..1694711)
Genome browser
AA seq
667 aa
AA seq
DB search
MEFAERSNKSFKLMSGYTPQGDQPEAIRQLVEGVENGERFQTLLGATGTGKTFTIANAIA
KLNRPTLVIAHNKTLAAQLCSEFQEFFPENAVSYFVSYYDYFQPEAYIPSTDTYIEKDSS
INDEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPSEYGSLVLSLRVGMEKSRDAILH
KLVDIQYQRNDINFIRGTFRVRGDVVEIFPVANNERAIRVELFGDEIERITEIDVLTGEI
VGTRDHIAIFPASHFVTQEETMKRALVNIERELEERLEELRSQNKLLEAQRLEQRTRYDI
EMMQEMGFCSGIENYSGPLTFRERGATPYTLMDYFPDDMLIVIDESHVTLPQIRAMYNGD
RARKEVLVDHGFRLPSALDNRPLRFEEFEEKAGQMIYVSATPGPYELEHCPEMVQQIIRP
TGLIDPVIEVRPTKGQIDDLLGEIRERIAKDERVLVTTLTKKMAEDLTDYFKDVGIKVRY
MHSDIKTLERMQILRDLRLGAFHVLVGINLLREGLDLPEVTLVAILDADKEGFLRSERSL
IQTIGRAARNADGRVIMYGDKITDSMDKAIKETERRRTIQLAYNEKHGITPQTIRKKIHD
VIEATKVAEQKADYLTGTGAGGKLSKKERQSVIQRLEAEMKDAAKNLQFERAAELRDALL
ELRAEGD
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgcagaacgatcgaataagtccttcaagctgatgtcgggctatacgccacag
ggcgatcagccggaggcaatccgtcagctggtggagggagtagagaacggcgagcggttt
cagacgctgcttggtgcgaccggtacaggtaagacgtttacgattgccaatgcgatcgcg
aagctgaatcggccgacgcttgtcatcgcgcataacaagacgctggcggcgcagctgtgc
agcgaatttcaagagtttttcccggagaatgccgtatcgtatttcgtcagctactacgac
tacttccagccggaagcgtacattccgtcgacggatacgtatatcgagaaagattcgagc
attaacgatgagatcgataagcttcgtcactcggcgacaagctcgctattcgaacggcgc
gacgttattatcgtggccagcgtgtcctgcatctacggcctcggttcgccttctgagtac
ggcagccttgtgctgtcgctgcgcgtcggtatggagaagtcacgcgatgcgattctgcat
aagctggtcgatattcaatatcagcgcaacgacattaacttcatccgtggtacattccgc
gtacgcggcgatgttgtcgagattttcccagtagccaacaatgaacgtgccattcgggtt
gagctgttcggcgacgagatcgagcggattaccgagattgacgtactgacgggtgagata
gttggtacacgcgatcatatcgcgatcttcccggcttctcacttcgtaacgcaggaagag
acgatgaagcgggcgctcgtcaacattgagcgtgagctggaggaacggctggaggagctg
cgctcgcagaacaagctgctcgaagcgcagcggctggagcagcggacgcgctacgatatc
gagatgatgcaggagatgggcttctgctccggcatcgagaactactcgggaccgctaacg
ttccgcgaacgcggcgcaacgccgtatacgctgatggattattttcccgatgatatgtta
atcgttattgatgagtctcatgtgacgctgcctcagatccgagcgatgtacaacggggac
cgcgcgcgtaaagaagtgctcgttgatcacggcttccgtctgccatcagcgctggacaat
cggccgcttcggttcgaggagtttgaggagaaggcgggtcagatgatttatgtctcggca
acgccgggcccttatgagcttgagcattgtccagagatggtacagcaaattatccgtcca
acgggtcttatcgatcctgtgatcgaagtgcgtccaacgaaaggacagatcgatgatctg
ctcggcgagattcgggaacggattgcgaaggatgagcgcgtgctcgtcacgacgctgacg
aagaagatggcggaggacttaacggattacttcaaggacgttggcattaaggtgcgctat
atgcactcggatattaagacgctggagcgaatgcagattttgcgtgatttgcgtctgggt
gcattccatgtgctcgtcggcatcaacctgctgcgggaaggtctggatttgccagaggtg
acgttagtcgctattctcgatgcagataaggaaggcttcctgcggtcggaacgctcgctc
attcagacgatcggccgggcggcgcgtaacgcagacggacgcgttattatgtacggcgac
aagattaccgactctatggataaggcgatcaaagagacggaacgccgtcgtaccattcag
ctcgcttacaacgagaagcacggtattacgccgcagacgatacgcaagaagatacatgat
gttatcgaagcgacgaaggtcgcggagcagaaggcagattacttgaccggcacaggtgcc
ggaggcaagctgtcgaagaaagagcgtcagtcggttattcagcgcctagaggccgagatg
aaagacgcagcgaagaatctccagttcgagcgtgccgcggagctgcgtgatgcgctgctg
gagctgcgtgcggaaggcgactga
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