Paenibacillus cellulosilyticus: HUB94_28815
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Entry
HUB94_28815 CDS
T07813
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03420
Nucleotide excision repair
pcel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUB94_28815
03430 Mismatch repair
HUB94_28815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_28815
Enzymes [BR:
pcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUB94_28815
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUB94_28815
MMR (mismatch excision repair)
Other MMR factors
HUB94_28815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
SLFN-g3_helicase
DEAD
NACHT
AAA_16
ResIII
AAA_30
nSTAND3
CtIP_N
Motif
Other DBs
NCBI-ProteinID:
QKS48886
LinkDB
All DBs
Position
unnamed4:complement(2169339..2171762)
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AA seq
807 aa
AA seq
DB search
MNEQDWKQEQERLNQVTEKLQARIEQLEPEVAGLRDQAGEIRKRFWEEVTVNTSTHEDFE
ETVQSISQQEALLSDRERSYRMRQQQWRSVNRLLPSPYFGRIDFIEDGLGIREQVYIGVS
SFVDSDGMSFLIYDWRTPIASMYYDHSPGAASYDTPGGRITGEMELKRQYQIRGGKLQHL
FDTSVTIGDELLQQVLGKGADPQMKSIVATIQKEQNAIIRNDNSRMLIVQGAAGSGKTSA
ALQRVAYLLYKHRERLKADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLEHGIG
KKLKLEDPFDQIEYVLTEQSTKAYEARLQAIAYKASEAYLQALRNYAGWLGREGMRFRSI
RLLDRDLITAEQMEAQFYGYDPSIRLANRVTLLQEWLLKQLSQLEPKEREALWVDEELDY
LDKDQYAAAYQELRVDRSIFEFSQAYENIREKMSNKVRRDEGDFDYAEHEEELLRKMIVK
EHFAPLRRSVKRMQFIDAEQLYTQLFSDKDAYMAMTGETELPELWPLICEQTKEKLSQSE
LFYEDATPFLYLKELVEGNRMSTEVRHVFVDEGQDYSMFQYEFLKRLFPRARMTVLGDFG
QAIFTQATELHGAQSPLIRLYGESETNLIRLVRSYRSTREIVEFTKSLLIGAQEIVPFDR
SGEKPLLVQVDCEEQLAEEIAKQLEALRAEGCDSIAVITKTAAESRDVYELLQAQSCPAL
RLITKETPTFEKGTLVIPAYLAKGVEFDAVLIYDASSKVYDRESERKLFYTACTRAMHRL
VLCAAGEWTPFLQQVDTSLYEVKSLSQ
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaggactggaaacaggagcaggaacggctcaatcaggtgacggagaagctg
caggccagaatcgagcagttggagccggaagttgctggacttcgagatcaggcaggagaa
atccgcaaacgattctgggaagaagtaacggtcaacacgagcacgcacgaggatttcgag
gagacggtccagagcatcagccagcaggaggcgctgttgtccgaccgggagcgcagctat
cggatgcggcagcagcagtggcgaagcgtgaaccgtctgctgccgtccccgtacttcggc
cgcattgatttcatagaggatggtctaggcatccgtgaacaggtctatatcggcgtatcc
tccttcgttgattcggacggcatgagcttcttgatttatgactggcggacaccgatcgcg
agcatgtattacgaccattctccgggagctgcttcgtacgatacgccgggtggccgaatt
acaggggagatggagctgaagcggcagtaccagatccgcggcggcaagctccagcacttg
ttcgatacgagtgtgacgataggtgatgagctgctccagcaggtgctcggcaaaggcgca
gatccgcaaatgaagagcatcgtggcaacgattcagaaggagcaaaatgcaatcattcgc
aacgataacagccggatgctcatcgttcagggggcggctggcagcggcaagacgtcagcg
gcgcttcagcgggttgcttacttgctgtacaaacaccgcgagcggctcaaggcggaccag
atcgtgctgttctcgccgaacccgatgttcaacagctatgtatcgaccgtccttcccgag
cttggcgaggaaaatatgcagcagacgaccttccaagagtatctggaacatggcatcggc
aaaaagctgaagctggaagatccgttcgatcagatcgaatatgtgctgacggaacagtcc
actaaggcgtacgaggcacggctgcaggcgattgcgtataaggcatcggaagcgtacctt
caagcgctccgcaattatgcaggctggctcggacgagaggggatgcgattccgcagcatt
cgtctgcttgatcgtgatctgattacggccgagcagatggaagcccaattttacggttat
gatccttccattcgtctagcgaatcgcgttacgctgctgcaggagtggctgctgaagcag
ctatcccagctggagcccaaggagcgggaggcgctctgggtggatgaggagcttgactac
cttgataaagaccagtatgccgctgcctatcaggagctgcgggtagatcgaagcatcttc
gaattctcgcaagcgtatgagaatatccgcgagaagatgagcaacaaagttcggcgggac
gaaggggatttcgattatgccgagcatgaggaagagctgctgcgcaagatgattgtgaag
gagcattttgcgccgctcagacgaagtgtgaagcggatgcagttcatcgatgctgaacag
ctgtacacacagctgttcagcgataaagatgcttatatggcgatgaccggcgagaccgag
ctgccggagctgtggcctctcatctgtgagcagacgaaggagaagctgagccagtccgag
ctgttctacgaggacgcgacaccgttcctgtacttgaaggagctggtagagggcaaccgg
atgagcacggaggtccggcatgtgttcgtcgatgagggtcaagactactcgatgttccaa
tatgagtttctcaaaaggctgttcccgcgcgcccgcatgacggtgctcggtgacttcggg
caggcaatcttcacacaggcaacggagctgcatggcgcacaatcgccgctgattcgacta
tatggagagtcggagacgaaccttattcgtctcgtccggagctaccgttccacccgcgaa
attgtggagtttacgaagtcgctgcttatcggcgcccaagagatcgtgccgttcgaccgg
agtggggagaagccgctcctcgtgcaggtagattgcgaggaacagctagccgaggagatt
gcaaagcagctggaggcgcttcgagcggaaggctgcgattcgatcgctgtcatcacgaag
acagctgcggaaagccgcgatgtctacgagcttctacaggcacagagctgcccggcactg
cggctcattacgaaggagacgccgacgtttgagaaaggaacgctcgtcattcctgcgtat
ctcgctaaaggtgtcgagttcgacgcggtgctcatctacgatgcctcctcgaaggtgtat
gatcgggagagcgaacgcaagcttttctataccgcatgtacccgcgcgatgcatcggctt
gtgttgtgcgcagcaggagaatggacgcctttcctgcagcaggtcgatacttcgctgtat
gaggtgaaatcacttagccagtag
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