Paenibacillus cellulosilyticus: HUB94_29595
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Entry
HUB94_29595 CDS
T07813
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pcel
Paenibacillus cellulosilyticus
Pathway
pcel03030
DNA replication
pcel03430
Mismatch repair
pcel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUB94_29595 (holB)
03430 Mismatch repair
HUB94_29595 (holB)
03440 Homologous recombination
HUB94_29595 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcel03032
]
HUB94_29595 (holB)
03400 DNA repair and recombination proteins [BR:
pcel03400
]
HUB94_29595 (holB)
Enzymes [BR:
pcel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUB94_29595 (holB)
DNA replication proteins [BR:
pcel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUB94_29595 (holB)
DNA repair and recombination proteins [BR:
pcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUB94_29595 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
TIP49
Mg_chelatase
SUFU
Motif
Other DBs
NCBI-ProteinID:
QKS48406
LinkDB
All DBs
Position
unnamed4:2333277..2334254
Genome browser
AA seq
325 aa
AA seq
DB search
MSMDQVPGQEKAKSMLRYALRSGKVSHAYLFSGPRGTGRKALALAFAQALFCTSGGDDAC
GHCIECRKFEHGNQPDLHMLEPDGASIKLGQIQQLQREMSYRNAGVQQKVYIVEQAETMT
LQAANSLLKFLEEPQSEIVALLLTENVQAMLPTIRSRVQMIPFVPLSPKELQAALEAEGI
ASMQARAASRIASGVEACRALIQQNGFAETRNVVIQLGKESLSRFTAAIVTVQQQVVKSD
VGQDPQLLLTMLLLWYKDMIHYQAGRLEEIVFIDQSEWIGKHAFARTPDGWVNCMEHVLE
CSKRIRAHVSTQLALEQLLVNLQEG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggatcaagtgccaggacaagagaaagcgaagtcaatgctgcgttatgcgctg
cgaagcgggaaagtgtcgcatgcgtatctgttcagcggaccgcgtggaacagggcgcaag
gcgcttgcgctcgcttttgctcaggcgttgttctgtacgtctggtggagatgacgcatgc
ggccattgcatcgagtgccggaaattcgagcatggcaaccaaccggaccttcatatgcta
gagccggatggcgcgtcgatcaagctcggccaaattcagcagctgcagcgtgaaatgtcg
taccggaacgcaggcgtgcagcagaaggtatatatcgtcgagcaggcggagacgatgacg
cttcaagcggcgaatagcctgctcaaatttctggaagagccgcaatcggaaatcgttgcg
ctgctgctcacagaaaacgtacaggcgatgctgccaacaatcaggtcgcgcgtacagatg
atcccattcgtgccattgtctccgaaggagctgcaggcagcactagaggctgaaggcatc
gcgtccatgcaggcgcgagccgcttccagaatcgcctccggcgtagaagcttgccgggcg
cttatccagcagaatgggtttgcagaaacaagaaacgtagtgatacaattaggcaaggag
agcctaagccgattcactgcagcgatcgttacggttcaacagcaggtcgtgaagtctgat
gttggacaagatccgcagcttttgctcactatgttgttattgtggtataaagatatgatt
cattaccaggctggaaggcttgaagaaatcgtttttatagatcagtcagaatggattggc
aagcatgcgttcgctcgcaccccggatggctgggtgaattgcatggaacatgtgctggag
tgcagcaagcgaatacgcgcacacgtatcgacgcagctggcgctggagcaattactggtg
aatctacaggagggctaa
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