Polistes canadensis: 106783690
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Entry
106783690 CDS
T05611
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pcf
Polistes canadensis
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcf03036
]
106783690
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106783690
microRNA pathway
RISC loading complex
106783690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
ResIII
DEAD
Dicer_platform
Dicer_dsRBD
PAZ
Helicase_C
dsrm
SLFN-g3_helicase
AAA_22
SWI2_SNF2
DUF2465
DSRM_2
Motif
Other DBs
NCBI-GeneID:
106783690
NCBI-ProteinID:
XP_014597948
LinkDB
All DBs
Position
Unknown
AA seq
1609 aa
AA seq
DB search
MDNTEVVSTKMENGGKEFVARPYQIDLYETALKSNTIIYLPTGTGKTFIAMMLLKRLSTA
VQKPYSEGGKRTIFAVNTVPLVVQQSEYIARHTGLSCKGYCGDMNVDYWTKEIWLKELEE
HQVLVMTSQILVDIITHGYLSLNRINLIIFDECHRAVNDHPMRQVMQQFEQCDAKEQPRI
LGLSATLLNSNVKLTNIIDSIKNLEITFHSKIATVGNIKGYSTNPKEVFVYYEKYIISES
LDKLIKKLANLKESLNLLSLPCSNSNKSSKEFKAKPINVKLQSIIEDIIEHVEMTGIYGV
NKCILLHLIQLEFKKRIIEDEDTIFIFDYLITELFAIRKIFDDEMRVYTDQYKIIKFVSD
QVLKLIRLLKHFNDNKLLDQKFCSIIFVKRRFTAKVLYHILKDLHATDEEYKFLIPDYVV
GFNNDPFKNSKEVLCISKWNKEVLQRFRNGLSNCVIATDVLDEGIDIPICTLIVRFDIPI
DFRSYMQSKGRARHSSSQYVIMLDRNDNSYIKKHKLFKDIDASLEQILVGKSDLREKPTE
KEIEEYLYTYTINPYVIKTKDGVVKSVLTEQAAISLVNKYCSVLLKSKLVSLVPIWKLHT
IEDKYQVSLQLPIISTLKDITFGDIMSSIDAAKRSAAFKTCVKLYEIGELSDNLLPTVNE
IIHDTDHLFPNWIEENCNNTSGTARKRRSYEIHHPESLFGAYPSAGTELYLHILNFSPAY
SVPQDNRNLIFYNLLNDPAGFGILSTKSIPKIPSFPIFMNVGELNVNTKVDYARLVLTDE
QIEELKTFHTTIFSKIVLAIKEFMTFDIDNLDNCFLIVPTDNENKINWSVVKKYKSINYT
KCLASLKPSDYELALIVPNYRTYPNVYIVTQVCDDLVPNSCFPGCDFYTYVEYYEEKHEL
KIQDLNQSMLEVKSISNKINCIKPRSMKSGLSKRKRADALEDYDEHLVPELCSKIEYPAL
YWLKATTLPSVLHRISQFLIALDLREIIVQEAKLGISIHDLKSHDWPPLIIDAQESPTKS
EQVLESALDEVIETEQPVPDLNGPEIDVLNTDASLYPWSKEQEPSDLERNADQIQLIDIQ
YYHNFMYAPTLEESAERKFKIISYSSKPDVSVPTLKILDKNYNNIGPDPVLIIQALTTAG
NDVFDLERLETLGDSYLKFISSLYLYTHYPTYNEGRLTALKGKIIGNRNLYYCGTKKSIP
GYMKVDDFIPLSTFIPPAYTAFRPLQKILLDNKVSPNVLYDIEIPEVERFSGYISGDTKN
NMQAKVLNSIDADTQTGIEYFLGMQVISDKSIADCVEALISVYLKSMGLVGAVKLMIWLN
ILPSNTDIHSLLYSVSQKPEIGLVDPNLYMPWADKLETNMGYKFQNRAYLLQAFTHPSFT
ENNVTEGYQRLEFLGDAIIDFLITAYIHQNWESLNPGHVTDLRSALVNNITFACLAVKYG
LHTSLLAYAPQLNDVIDRFVKFQEEGNHTVNNENLWILLKEDECNMAEYVDVPKVLSDIF
ESFIAAIYMDTGKDIKKVWEILYALMHKEIDTFSQNIPKQPVRLIYEKLGSNAKFFSATI
VEGTNTIMVPLEIITKRVTKIFHGFGANKKQAKCAAAKQALKYLRCRNE
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggataatacagaagtagtcagtacaaaaatggaaaatggagggaaggaattcgtcgcc
agaccatatcaaatagatctttatgaaacagcattgaaatctaacactattatttatttg
ccgactggtacgggaaaaacatttatagcaatgatgcttcttaagagattaagtacagct
gtacagaaaccttatagcgaaggtggtaagagaacaatatttgcagttaatacagtacct
ttagtagtgcaacaatctgaatatattgcaagacatacaggtttatcatgtaagggatat
tgtggtgatatgaatgtcgattattggacaaaagaaatatggttaaaagaattggaagaa
catcaagttttagtaatgacatctcaaatattggtagatattattactcacggatactta
agtttaaatagaattaatttgattatctttgacgaatgtcacagagcagtaaatgatcat
cctatgcgacaagttatgcagcaatttgaacaatgtgatgccaaagagcaacctagaata
ttaggattgtcagcaactttacttaattctaacgtcaaattgactaatattatagattcg
attaagaatttagaaataacatttcattcaaaaatagcaacagtaggaaatataaaggga
tattctacgaacccgaaagaagtttttgtttactatgaaaaatatattatttcagaaagt
ttggacaaattgattaaaaaattagcaaatttaaaagaatctttaaaccttttgtcttta
ccatgttctaactccaataaatcaagtaaagagtttaaagcaaaaccaataaatgtaaaa
cttcagtctattatcgaagacattatagaacatgtggaaatgacaggtatatatggcgtt
aataagtgtattttattacatttaatccaattagaattcaaaaagaggatcattgaggat
gaagatacaatatttatctttgattatttaataactgaattatttgcaataagaaaaatt
tttgatgatgaaatgagagtttatacagatcaatataaaataatcaaatttgtatcagat
caagtcctcaaacttatcagattattgaaacatttcaatgacaataagttactcgatcaa
aaattctgttccattatttttgtaaaacgtagatttaccgctaaagtattgtatcatatt
ttaaaggatttacacgctaccgatgaagaatataaatttttgattccggattatgtggta
gggtttaataatgatcctttcaaaaattctaaagaagttttgtgtatttctaagtggaac
aaagaagttttacaaagatttagaaatggattaagtaattgtgtcatagcaacagatgtt
cttgatgaagggattgatatacctatctgcacacttatagtgcgttttgatattccaata
gatttccgatcttatatgcaaagtaaaggacgcgctcgtcattcgtcaagtcaatatgtt
attatgttagatagaaatgataatagttatatcaagaaacacaaactatttaaagatatt
gatgcatccttagaacagattttagtaggaaaatcggatcttcgggaaaaacctactgaa
aaggaaattgaggaatatttatatacttacacaatcaatccatatgtaataaaaactaag
gatggcgtcgtcaaaagtgtactaacagagcaagctgcaatttctttagtaaataaatat
tgcagtgtattgttgaagtcgaaattagtatccttagttccaatttggaagttgcataca
attgaagacaagtaccaggtatcccttcaattaccaatcatatctacattaaaagacata
acatttggagatattatgtcttctatagatgcagctaaaagatctgctgcttttaaaact
tgtgttaaattgtatgaaattggtgaattatccgacaatttattgccgactgtgaacgaa
ataatacacgatacagatcatctatttccaaattggatagaggaaaactgtaacaacaca
agcggtactgctagaaaaagaagatcttatgaaattcatcatccagagtcgttatttggt
gcatatccttcagcaggaactgaattatatcttcatattctcaattttagtccagcgtat
tcagtaccacaagataatagaaatttaatattttataatttattaaacgatccagcagga
tttggaatactttcaacgaaatcaattccaaagattccatcatttcctatcttcatgaat
gttggagagctaaatgttaatactaaagttgattatgcaagattagttttaactgatgaa
cagattgaggaattaaaaacttttcataccacaatatttagtaaaattgtacttgcaatt
aaagaattcatgacatttgatattgataatcttgataattgttttcttattgtaccaact
gataatgaaaacaaaataaattggagtgttgttaagaaatacaaatctatcaattatact
aaatgtcttgcatcgttaaaaccttccgattacgagttagcattgattgttcctaattat
agaacatatccaaatgtatatatcgtcacacaagtatgtgatgaccttgtacccaattca
tgttttccgggttgtgatttttatacttatgttgaatattatgaggagaaacatgagttg
aaaatacaagacttaaaccaatcaatgttagaagtaaaatcaatttcaaacaaaattaat
tgtataaaaccaagatctatgaaatctggtttaagtaaacgaaaacgtgcagatgcactt
gaagattatgatgaacatttagtaccagaactgtgttctaaaattgaatatcctgcattg
tattggcttaaagcaaccacattaccatcggttcttcatagaatttcacaatttttaatt
gcattagatttaagagagattattgttcaagaggcaaagctgggtatttcaatacatgat
cttaaatctcatgattggcctcctttgattatagatgcacaagaatctccaactaaatca
gaacaggtgttagaaagtgcattagatgaagttatagaaactgaacagccagtaccagat
ttgaatggacctgaaattgatgttctaaataccgatgcaagtctgtatccttggtcaaaa
gaacaagaaccatcagatttagagagaaatgctgatcaaatacaattaatcgatatccaa
tattaccataattttatgtatgctcccacactagaggaatctgcagaacgtaaattcaaa
ataattagttattcaagtaaacctgatgtatcagttccaactttaaaaatactagataaa
aattataataatataggaccagacccagtactaataatacaggcgcttacaactgccgga
aatgatgtatttgatttggaaagattagaaactttaggagattcttatttaaaatttatt
tcatctttatatttatatacccactatccaacttataatgaaggtcgtttgactgcactt
aaaggaaagataattggaaaccgtaacttatattattgtggaacaaaaaagtccatccca
ggatacatgaaagttgacgactttataccactgagcacgtttatccctccggcttataca
gcatttcgtcctttacaaaaaattttattagataacaaggtatcaccgaatgtgttgtac
gacattgaaatacccgaagtagaaagattctctggatatataagcggagatacaaaaaat
aatatgcaagcaaaagttttgaattcgattgatgcagacactcaaacaggtattgagtat
ttcttaggtatgcaagtaatttcagataaatctattgcagattgcgtagaagcattaata
agcgtgtatctaaagagtatgggattggtaggagctgttaaattaatgatttggcttaat
attttgccttccaatactgatattcactcattattatatagtgtttcacaaaagccagaa
attggtttagtagatccaaatctatatatgccatgggctgacaaactagaaaccaatatg
ggttataagtttcaaaacagagcatatttgttacaggccttcacacatccatctttcaca
gaaaataatgtaacagaaggttatcaaagattagaatttttaggtgatgctattattgat
ttcttaattactgcttacattcatcaaaattgggaatcattaaatcctggccatgttaca
gatctgagatctgcacttgtaaataatattacatttgcatgcttagctgtaaagtacggt
ttgcatacatctcttttggcctacgctccgcaattaaatgatgttattgatcgattcgtt
aaatttcaagaagaaggaaatcacacggttaataacgagaatctctggatcttacttaaa
gaagacgaatgtaatatggctgaatatgttgatgtccctaaagttttaagcgatatattt
gaatctttcatagcagctatttatatggatactggcaaagatattaaaaaagtctgggaa
attttatatgctcttatgcacaaagaaattgatacctttagtcaaaatattccaaagcaa
cctgtacgtttaatctatgagaagctaggatcaaatgctaagtttttctccgctactata
gtagaaggtacaaatactattatggtacctttagaaataataaccaaaagggtaacaaaa
atttttcatggatttggtgccaataaaaagcaagctaaatgtgcagcagcaaaacaggct
ttgaagtatttacgttgtagaaatgaatag
DBGET
integrated database retrieval system
