Polistes canadensis: 106783859
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Entry
106783859 CDS
T05611
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pcf
Polistes canadensis
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106783859
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
106783859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
106783859
NCBI-ProteinID:
XP_014598261
LinkDB
All DBs
Position
Unknown
AA seq
1996 aa
AA seq
DB search
MTHPSHQTNGASLEDCHTNFFALTDLCGIKWRKLVWGEVAGGFGGTPLEDPVLSSFSRCL
AGDILCVWRRVAATPAASAGGPATASGPGPGIFELGIAPSPAPPPLSLTAAKELWIFWYG
EEPDLSGLVSPELIACESEQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGRWFV
QPYDGFEKHRCNSSHLSFSFAFFVHGESTVCASVDVRQHPAVRHLTRACLQRTQTSQSGV
KVILAPYGLAGTLTGQVGRMDSQLLEEWKHFYPINSNNAETGLSPLVEVLVGGVRMRYPS
CYVLVTDMDDTPPGAPLSPPNSPISCENSFPIEQDFGAATELPERVWAECTLSSPVSASK
TESSTELGTWTFVEPTQKASCTCSKYTNPGGWKGLVSSQVQRERVDKGGRRVVPFHRRST
TQWDACPSVPASAPRTVLSRVEAPSTPPEGPPSYSRGPPTGGDCLPVPSVGSPGSPAPSP
LPTPHSEPASVPPAEPTMPTLSPQPPPSHTNTAPPLTPSQGPKSASSACNNQAHSPLPGQ
TLKRPILASREYEGALLEDEQPLSWLYDYSTQEAWLSHPVKRFKGSTSGPTNVRSNTLYP
PMNLQALQPQAPKLEIKQEPNVTTSDCIGRRSDPYEFDAVGEENNTNVDGLRRQRDDPPK
PGSLFTSEGLQASYKDLDQIFDNSDPDTSSDETFQNLNQLQVQTPPGSNKSGGMHEETRI
DGTNKHNNRSVGVLRPEELSKMFPTPPSLEHNPVASPCQLSDPLVEQTDLSVPQRPLRHL
PDIYPNMGSPQEEPIDDWSFVFKPAPICKMVGSSKYAPLTNLPSQSLPPVTLPSHCVYRP
SWQCSSTSINSDKPLPPSRPGSVQQQPCPPSPAPLGAPYRTTTLPGRPPPPPYDQPSPAT
STTSSYLNKNLNSIEADTPGPTRAPESNSLVVNILLGDTALNIFRDHNFDSCSLCVCNAG
PKVVGNIKGADAGVYLTNSWGNGSVLIQDDDQIRCSCGFSAVVNRRLAHKAGLFYEDEME
ITGIAEDPTDKKKGSLGLVACNGGKSVEGLDIIPSNVLELLREQCLLVQSSASSLYRAAR
NYASTKSYPMHAPTVNTLEFNDGNEVSLAALDQGKIDTTHSERTNRVNGIHRWVFLRARG
PQCSGDIVRMMRALQPLLQDAVQKKCTTRMWEAPYTVAGPLTWRQFHRLAGRGTDDRCEP
QPIPALVVGYDRDWLSLAPYALGYWEKLLLEPYAGPRDIAYVVVAPDSDCVVSKVKSFFR
ELSTTYEICRFGRHTSISKLLRDGILRVGKSSAQKLSKQPIDDWFKCLGENRIGELLRLY
AQVCNHRLAPYLTQVIQDRSLLDPGDVQLPNKQQQQQQQQQQQQQTTTPVTDTMPATPDV
MTTKPESVESENPRSETPSNTTNPNPNIGNTTPTPQLSTGNTTTTIGPDEEEVEPPAVVV
YLIEPFSLGGPEDSDRRRLAILALLRAYSTAVNSMPENIRSNINVQLISLESIMELGRAR
ERRKKEDEMRALALNVFLQGRRLLNHNSMVKSLTGFGTAAAADLFLKSKDERNKAPYRLY
APAYVLAPLRAKSEAPESFGIAGPEECAVLYLSYCLSEDQSWLLAVATDDRGEIFETATI
NIDIPNRKRRKRASARRIGLQKLMDFILGVMSQGVQPWRLVVGRVGRIGHGELKGWSWLL
SRKALLKASKHLKEICGQCSLLYPSAAPCVLSACLVSLEPDSTLRLMADQFTPDERFSQA
SVNCQLSTPQDVTCTHILVFPTSATTQSSQTAFQEQHINGPELGDDELFSALNDDMPEAM
EGMGDFNDIFNVWPEAGAGGGQSPSGSPHRPEGSPLGGDGGGSGLGNHDGPGSPFQCSNA
SRIAVAEQSEEVGTLLQQPLALGYMVSTAPTGRMPPWFWAACPHLEEVCPAFLKNALHLH
SPSIQQSTEDLLQQQSALTAHPLDSQYTTDVLRYVLEGYNALSWLAIDANTKDRLSCLPV
HVQALMQLYHAAAALV
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccatcgcatcaaaccaacggcgccagcctggaggactgccacacgaatttc
ttcgcactgacggacctctgcggtataaaatggaggaagctcgtgtggggcgaagttgcc
gggggtttcgggggtactccactggaggatccggtactgtcgagcttctcgcgttgcctc
gcgggtgacattctgtgcgtgtggcgacgggtagccgccacgccggctgcctccgctggc
ggcccggcaaccgcttctggacccggccctggcatcttcgaactgggcatcgcgccctct
ccggctcctccaccactatctttgactgcagccaaggaactctggatcttctggtacggc
gaggaacccgatctttctggtctcgtctcgccagagctcattgcctgcgaaagcgaacaa
ggatcatgggaaagtggtttgtcatacgaatgccggtctcttctttttaaagctcttcat
aatttgatcgagcggtgcttattgtcacgtgatttcgttcgattaggaaggtggtttgtg
caaccatacgatggctttgaaaaacatcgttgtaacagtagccatttgtcattctccttc
gcattttttgtgcacggagaaagcactgtatgtgcgagcgtggatgtccgccagcatccc
gcggtacgacatcttactagggcatgtttgcaacgcactcaaacttctcaatccggcgtt
aaggtgatcttggctccttacggattggcgggaactttaacaggccaagttggacgtatg
gatagtcagcttctggaagaatggaaacatttctatccgattaatagtaataacgcggaa
acaggattgtcaccgctcgtggaagtcctcgttggtggtgtacgcatgcgttatccttca
tgttatgtattagttacggatatggacgatacaccaccgggtgctccattatcgccacca
aatagtcctattagttgtgaaaattcttttcccatcgaacaagattttggagctgccacg
gaattaccagaacgcgtatgggcagaatgtactttaagttcgccggtatccgcttccaag
acagaatcttccacagaacttggaacctggacatttgttgaaccgacgcaaaaggcttcc
tgtacttgctcaaagtataccaacccagggggttggaagggcctggtctcctcacaggtt
cagagggagagagtagataaaggtggacggagggtcgtaccatttcatcgacgctctacc
acccagtgggatgcttgcccctctgttcctgctagtgcccccaggaccgtattgagcaga
gtagaagcaccgagtacaccaccagaaggaccaccatcttattcgagaggtccacccacc
ggaggagattgtttaccggttccatcggtgggatcgccaggatcgccggcaccatctcca
cttccaactccgcattctgagcctgcatcggttccaccagcggaaccgacgatgcctacg
ctcagtccacaaccaccacccagtcacacaaacactgcccctcctttaactccgtcgcaa
ggtccaaaatcggcatcttctgcatgtaataaccaggcacatagtcctttacctgggcaa
acactaaaacgaccaatcttagcctctagagaatatgaaggtgctcttttagaagatgaa
caacctttgtcttggctttatgattattcaacgcaagaagcttggctcagccatcctgtg
aaacgttttaaaggttcaacgagcggtccaactaatgtccgaagtaacactctgtatcca
ccaatgaatttgcaagctttacaacctcaagcaccaaaattagaaattaaacaggaacca
aacgtaacaacaagtgattgtatcggaagaagatcggatccttacgaatttgatgcggtg
ggggaagagaataataccaacgtcgatggattaaggcggcaaagagacgatccacctaag
ccaggatctttatttactagcgaaggtcttcaagcgtcttataaggatttagatcaaata
ttcgataattctgatcctgacacttccagtgatgagacctttcagaacttgaatcagctc
caagtgcaaacaccaccgggttccaataaatcgggcggcatgcatgaagagacaaggata
gacggtacaaataagcacaacaatcgtagtgtaggagtattacgacccgaagaactctcc
aaaatgtttccaacgccaccatctttggagcacaatccggtcgcttcgccgtgccagttg
agcgatccgcttgtagagcaaaccgatctctcggttccgcaacgtccactcagacatctc
ccggatatttatcctaatatgggatcaccgcaagaggaaccaatcgacgattggtcattc
gtgttcaagccagctcccatctgcaagatggttggttcttccaaatacgccccacttaca
aatctgcctagccaatcccttccacccgttacactgccatcgcactgcgtgtacagacct
tcctggcagtgtagttcgacttccatcaattcggataaacctcttccgccgtctagacct
ggatccgttcaacaacaaccttgcccaccgagtccagcgccattaggtgctccataccgt
acgactactcttccgggtaggccgcctccaccgccgtatgaccaaccgagcccagctact
tctacaacatcttcgtatttaaataagaatttaaacagtatcgaggcagacactccgggc
ccaactcgtgcaccggaatcgaattctctcgtggtgaatatacttttaggtgatacggca
ttaaatatttttcgcgatcataatttcgacagttgcagtctatgcgtatgcaatgcaggt
ccaaaagtcgttggtaatataaaaggtgccgatgcaggtgtttatttaacgaactcttgg
ggaaacggtagtgttttgattcaggatgacgatcaaatcaggtgcagctgtggctttagt
gctgtggtgaatagacgattagctcataaagcgggattgttttatgaagacgagatggaa
ataacgggaattgctgaggatccgacggacaaaaagaaaggatcgcttgggttggtagcg
tgtaacggaggtaaatcggtcgaaggattagacattataccttctaatgtcttggaatta
cttcgagagcaatgcttgttggtacagagttctgcaagcagtctttacagagcggcaaga
aattatgccagtacgaaaagttatcctatgcacgcgccaacggtgaatactctcgaattc
aacgatggcaacgaagtctccctcgcagcattggatcagggaaagatcgacactacgcat
agtgaaaggactaatcgtgttaatggtatacatcgttgggtctttctaagagctcgcggt
cctcagtgtagcggtgatatcgtgagaatgatgagagccctgcagccacttctgcaagat
gcagtacagaaaaagtgtactaccagaatgtgggaagctccttatacagtagctggacct
cttacttggagacaattccatcgtttagctggacgtggaacggacgatcgttgcgaacca
caaccgatacccgcgcttgttgtaggatacgatagagattggctgtcgttagcaccttat
gctcttggttattgggagaaactattgttggaaccatacgctggcccgagggacatcgct
tatgttgtcgttgcaccggatagcgattgtgtagtcagcaaagtcaaatcatttttccgt
gaactttcaaccacttacgaaatctgtcgatttggaagacacacatccatttcaaaacta
ttacgcgatggaattcttcgcgtgggtaaatcatcggcacaaaagttatcgaagcaaccg
atcgatgattggttcaagtgtcttggtgaaaatcgaataggagaattgttaagattatat
gctcaagtgtgtaatcatcggctggcaccgtatttgacccaggttatacaagatcgaagt
ttattagatcctggtgatgttcaattaccaaataagcaacagcagcagcaacaacaacaa
caacagcaacaacaaacgactactcctgttaccgatacaatgccagcaacgcctgatgtg
atgacaacaaagccagaatcagttgaaagcgaaaacccaagaagcgagactccctcgaat
acaacaaatccaaatccgaatatcggtaatactacaccgactccgcaattgtctaccgga
aatacaacgacaacaataggacctgacgaggaggaagtcgaaccaccagctgttgttgtt
tatttaattgaaccattttctttgggaggacctgaagattcggatcgtcgacggctcgct
atactagctcttttacgggcgtattcaactgctgtgaatagcatgcctgaaaatattaga
tctaacataaatgttcagttaatatcgctggaaagcataatggaattaggtcgggcgaga
gaaaggagaaagaaagaagatgagatgagagctttggctttgaacgtgtttcttcaagga
cgtcgtttgctgaaccataattccatggtaaagagtcttaccggttttggtaccgcagcc
gccgcagacttattcctgaaaagtaaagatgaacggaacaaagcaccgtaccgactgtac
gcgccagcttacgtattggcccctttaagagcaaaaagcgaggctccagaatcatttgga
attgctggaccagaagaatgtgctgtactgtatttgagttattgcctcagcgaagatcaa
tcttggttgttggccgtggcaacggacgatcgaggggaaatctttgaaactgctaccatt
aacattgatatacctaatagaaaacgaagaaaacgtgcatctgccagaagaattggattg
cagaaacttatggactttattcttggtgtgatgtctcaaggtgtgcaaccgtggagatta
gttgtaggtcgtgttgggcgtatagggcatggagaattaaaaggttggagctggctactt
tctagaaaagcccttttaaaagcttcgaaacatttgaaagaaatatgtggacaatgcagt
cttttatatccgtcagcagcaccttgtgtactaagcgcatgtttagtatccctagaacct
gattctactctcagattaatggccgaccaattcacccccgatgaaaggtttagtcaagca
tcagtaaactgccaattatccacaccacaagatgttacatgtactcatattcttgttttt
cctacgtcggctactactcagtcctcccagactgcctttcaagaacaacatataaatgga
ccagaattaggagacgatgaattattttctgctttgaatgacgacatgccagaagcaatg
gaaggcatgggagatttcaatgatatttttaatgtatggcccgaggcgggtgcaggtggt
ggccaaagccctagcggaagtcctcatcgacccgaaggatccccgttaggaggagacggc
ggtggttctggcttaggcaatcacgatggaccaggtagtccttttcaatgcagtaatgca
tccagaatagccgttgctgaacaatcggaagaagttggtacgcttttgcaacaaccgctt
gctcttggttatatggtgtctactgcaccgacgggacgaatgccaccatggttttgggca
gcttgcccgcatctcgaggaagtttgtccagcttttttgaaaaatgctttacatctgcac
agtccctcgattcagcaaagtactgaggatctccttcaacagcaaagcgccctcactgct
catccacttgattcgcaatataccaccgatgtactcaggtacgttttggaaggatataac
gcattgtcgtggctcgcaatcgatgcaaacaccaaggatcgattatcctgtttaccggtg
catgtacaggcgctcatgcagctctaccacgcagcggcagctctcgtctga
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integrated database retrieval system
