Polistes canadensis: 106784396
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Entry
106784396 CDS
T05611
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106784396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106784396
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106784396
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106784396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106784396
NCBI-ProteinID:
XP_014599358
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MANLNFEQPPRSIANTSLTSRAGGGGGLNSSTLAGHVTPTSGMFSGSSASTSSTANSVVV
VTNVYPGASGSGGTQTSHQSQQQQLSPMSSRGLFGQRAFTDRRTMPALGTSNPMGSMGSF
GIPPSRNYGSQGAINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSVSGDKSISVGLGPEIGQD
VLQANRAPGSEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINSAIRDKLAPVK
LNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGLVEKTSTYE
RGTYYYFDAQNWRKVAKEFHLDYTKLESRPHLPTNFHQTQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaattttgagcagcctccacgcagtattgcgaacacaagccttacttcg
cgcgcgggtggtggggggggcttaaattcgtcgacccttgcaggtcatgtcacgcccaca
tcgggcatgttctcaggctcatctgcgagtacttcaagtacagcgaactctgtggtagtg
gttaccaacgtttatcctggtgcatcaggatcaggaggcacgcagaccagtcatcaatcc
caacaacaacagctctctcctatgagtagcagagggctgtttggacaaagggctttcaca
gatagacgtacaatgcctgctcttggaacctcaaatccaatgggtagtatgggcagtttt
ggtatacctccaagtcgcaactacggatctcaaggtgcgattaataatttccattctgta
tttgggagtggaggaggtggagatacaagtacaccccctctattagacctttcggaattt
ccatccttgacaaatagaggccagggtgattccatgcctcagcctagtcccatgcctgga
aaacaaccgtatgttggaatggtaaagcaaccaacatcagagtcgagtgaatttactatg
agttcagaagattttcctgctttaccaggcacacaaaacagagaaggtccatcaccaggt
ggaagtgtttctggagataaaagtatatccgttggtctaggcccagaaattggccaggat
gtattgcaagcaaatagagcacctggatctgagaaatctcagtcgtctaaaagaggcatt
caaacatctccagatggaaaggtgacaaatatacctgcgagtatggtaaaggatcaattt
ggaatggttggtctcttaacttttatcagagcagcagaaacggatccaaatttagtatct
ttggcgttaggacaagatcttacagcattaggattgaatcttaattctcctgaaaatttg
tatcaaaattttggtggtccttgggcagaaacaccgtgtagaccacaggatattgacttt
catgtaccaccagaatatcttattaattcagcaataagggataagttagcaccagttaaa
ctaaatcggtacaaagatgatctactattttatatgttttatacaaatgttggggatgtc
ttgcaactggcagctgcggcagaattgtacagcagggaatggagatatcacatggaggag
aaagtgtggataacgcaagcacctgggttaggacttgtagaaaaaacatcgacatatgaa
cgtggtacttactattattttgatgcgcaaaactggaggaaggtagctaaggaattccat
ctggattatacaaaactagaaagtagacctcatcttcccacaaactttcatcaaacccag
ccttga
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