Polistes canadensis: 106784599
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Entry
106784599 CDS
T05611
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106784599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106784599
Enzymes [BR:
pcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106784599
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106784599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DNA_pol_A_exo1
RNA_bind
DUF6279
Motif
Other DBs
NCBI-GeneID:
106784599
NCBI-ProteinID:
XP_014599816
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MIEVTEENFTEIYPQLKNDLENADVIAIDTEFTGLECDEISKISLFDTIEERYENLRSTL
EPFIIIQFGITTLKRIEDKNEFIPKSYEFYLLPKSIFTKNKIISWQISVIEFLSYHSFNF
NKVVNHGISYVNQIEEAILNEQWKNNTLYKNVEESMSYKEKDDVNHFSSMIAEWLKHLNN
KEIYTIPAFSHKFQYFLQKILRERFRNIWTICNKQTVQVFKISSDVREMLENEKEQSLEH
ILLNSYIGFSNVFKLLVELKKPIIGHNILLDLMFMHKLFYKPLPRRYYDFKTEIHNLFPI
IYDTKYISNQVKEKYEIQVLNSLGSLYCHFSNLAKTFPHIADYTNNTSKNFHNAGWDSYC
TGYIFLKMVYMFANDKYPLSSNYVITHEELMSLTQEYANCINLSNANALYLKLDGKDPKS
GRPPWLFVKTRESTNLDINEISKELSQFGTFDIKPYNRGRALVAVANHTSAYDILKHFHN
NKELSVVRYNPIKHAPSMKYLLLGSVLVSSGMLAWIFRRSVSPKLSDRDLSCQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagtcacagaagaaaatttcacagaaatatatccacaattaaaaaatgattta
gaaaatgcagatgtaattgctattgatacagaatttactggcttggaatgtgatgaaatt
tcaaaaataagcttgtttgataccatagaagaacgatacgaaaatttacgaagtaccctt
gaaccatttataattattcaatttggtattactacgttaaaaagaattgaagataaaaat
gaatttattcctaaatcttacgaattttatctactacctaaatctatttttacgaagaat
aaaataatctcatggcaaatttcagtaatagagttcttatcttaccactcctttaatttt
aataaagtagttaatcatggtatttcatacgttaaccaaattgaagaagctatactaaat
gaacagtggaaaaataatacattgtacaaaaatgttgaagaaagtatgtcatataaagaa
aaagatgatgttaatcatttcagttctatgatagctgaatggttaaaacatttgaataac
aaagaaatttacactattcccgcattttctcataaatttcagtattttttacaaaaaatt
ttaagagaacgttttcgaaatatttggaccatatgtaataagcaaacggtacaggtattt
aaaatatcatcagatgtacgggaaatgttagaaaacgaaaaagaacaaagcttagaacat
attttgttgaattcgtatataggattttcaaacgtatttaagctcttggtagaattaaag
aaacctattattggacataatatcttactcgatttgatgttcatgcacaaattattttac
aaacctttaccaagaagatattatgacttcaagactgaaatacataatttatttcctata
atttacgatactaaatatataagtaaccaagtaaaagaaaaatacgaaatacaggtttta
aattcacttggttctctttattgtcattttagcaacttggcaaaaacatttccacatata
gcagattatacaaacaatacatcaaagaattttcataatgcaggatgggattcgtattgt
actggatacatatttttaaaaatggtatatatgtttgctaatgataaatatccattgtca
tctaattacgtcataacccacgaagaattaatgagtttaacacaagagtatgcaaattgt
ataaacttatcaaatgctaatgcactttatttgaaacttgatggtaaagatccaaaatcg
ggaagaccaccgtggctgtttgtaaaaacacgagaatcaactaatttagatataaatgag
atttcgaaagaactatcgcagtttggaacttttgatataaaaccttacaatcgtggacgt
gctttggtagctgttgcaaatcatacgagtgcgtatgatattttaaaacattttcataac
aacaaagaattaagtgtcgttcgttacaatccaataaaacatgctccatctatgaagtat
cttcttttaggtagcgtgctcgtatcgagtggaatgttagcttggatatttcgtcgttct
gtatccccaaaactttctgatcgtgatctttcctgccaataa
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