Polistes canadensis: 106784684
Help
Entry
106784684 CDS
T05611
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106784684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106784684
03012 Translation factors [BR:
pcf03012
]
106784684
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106784684
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106784684
Translation factors [BR:
pcf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106784684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_N
HA2_C
AAA_22
ResIII
nSTAND3
AAA_19
ATPase
AAA_14
ABC_tran
NPHP3_N
PhoH
NACHT
AAA_23
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
106784684
NCBI-ProteinID:
XP_014599977
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MSHHRGSKSAPRTSRFGRENEQIQSNASMSTSKNNGESGERSKGHPSWLRGKEIGLYYRD
QHKNKVKKKQEHLIKVKESVENTMILAVENSKGLYNKVCNNDIKPDITNNSDLENKYTHI
HDSRFKQKFLELLSGNIQNNIAKAMSVKSRLERDPASDKILFEEFNKKQNSNEYVAMQAF
RKKLPSYDKKAEILDLIKNNQVIVISGETGCGKTTQVGQFILDNELENENGSITRIICTE
PRRISAISVAERVAAERAERLGKSVGFQIRLEKIPPRDRGSILFCTTGMLLQFMQSDPAL
KGFSHIILDEVHERSTESDFIITLLRQIIPVRPDLKVILMSATLNSKRFSDYYSNCPIIH
IPGFTYPVEEFYLEDVLLFTEFRFPESQFTVKELSYKRHQKKYKEQHDKHCNYLEMINSY
VVNLVIEKKYPMSVINQLRNPNCENLSLELIEELIRHICTTKEPGAILVFLPGMMDIIKL
NKIILNSGHYPTNKYIIYPLHSRMPTIDQRLIFKEPPLGVRKIIIATSIAETSITIEDVV
HVIDCGKTKLSRFDVNENMETLEPEWVSKANAKQRRGRAGRVKKGYCYHLYSKARELTFE
DYQLPEMLRTRLEQVILQIKILQLGEAKEFLASVMDPPNLKAIDLSLELLRTLNALDNDE
HLTPLGYHLAQLPLDPRTGKMIIWAALFSCVDPVFSIAASLTFKDAFYCPLGKEEKAMEK
KLELSMWQYSDHIALAEALRRFEINHNFGFCYQYFLSYNTLNLLSEMKRQFAQHLCGMKF
LNSDDPIDENANRNSNNIALIKAIVCVGLYPNIATIKHGGDFKRGVIAWTPEDGTVKVHP
SSVNNKMKDFPSPFLTYFTKQRSTAIYLHDTSCVTAPILLFAGSNSFIQRTRQGFVITLN
TSLSFLCDPRTAILIQDLRTIINNLLEYKISHPGTVNWDNQEGQILNALIEFVSQTDEEM
GFGKLNG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcatcgtggatcaaagtcggcaccaagaacgtcaagatttggaagagaaaat
gaacaaattcaatcaaatgcatcgatgtcaacttcaaaaaataatggagaatcaggggaa
agaagcaaagggcatccctcatggttgagaggaaaagaaattggtttatattatagagat
caacacaaaaataaagttaagaaaaagcaagaacatcttatcaaagttaaagaaagcgta
gagaacacaatgatattagccgtagaaaattctaaaggactgtacaataaagtgtgcaat
aatgacattaaaccggatattacaaacaacagtgatttagaaaacaaatatactcacatt
catgactctagatttaaacaaaagttcttagaacttctgtccggtaatatacaaaataat
attgccaaagcaatgtctgttaaatctagactggaaagggatcctgcctctgacaaaatt
ctatttgaagagtttaacaaaaaacagaatagtaacgaatatgtagccatgcaagctttt
agaaaaaaactaccatcgtatgataagaaagcggagatcttagatttaattaaaaataat
caagttattgtaattagcggagaaactggttgtggtaagacaacgcaagttggacaattt
attctggataacgaattagaaaatgaaaatggtagcattaccagaattatttgtacggaa
ccgagaaggatatctgcgatatctgtcgctgaaagagtagctgcagagagagcggagaga
cttggcaaatctgtgggctttcaaataagactcgaaaagataccacctagagaccgtgga
agtatattattttgtactaccggtatgctcttgcaatttatgcaatccgatcctgcatta
aaaggattttcgcatataatattagacgaggttcacgaacgtagtacagaaagtgatttt
attattactttattaaggcaaataattcctgttagaccagatttaaaggtgattttgatg
agtgcaacacttaattccaaaagattttccgattattacagtaattgtccgataattcat
ataccagggttcacttatcccgtagaagaattttatttagaagatgtattattatttaca
gaatttcgtttccctgagagtcaatttacagtaaaagaacttagttataaaagacatcaa
aagaaatataaggaacagcacgacaaacattgtaattatctagagatgataaattcctat
gtagtaaatcttgtaatagaaaaaaaatatcctatgagtgtcataaaccaattacgcaat
ccaaactgtgaaaatttatctttagaacttatagaagaattgattagacatatatgtacg
actaaagaaccaggggctattctagtatttttacccggtatgatggatatcattaagtta
aataaaattatattgaattccggacattatccgactaataaatatattatttatccactt
cactctcgtatgccaacaatcgatcagaggcttatattcaaagaaccaccacttggcgta
cgtaaaataatcatcgccacatcgattgctgaaacatccataacgatagaagatgtggta
catgtaatcgattgtggaaaaacaaagctttccagattcgatgtaaatgaaaatatggaa
acgttagaacccgaatgggtttcgaaggctaatgccaaacaacgacgaggccgtgctgga
agagttaaaaaagggtattgttatcatctgtacagtaaagcaagagaactaacattcgag
gactaccaattacccgaaatgttacgcacgcgattagaacaagttatattgcagattaaa
attttacaattaggagaagcgaaggaatttcttgctagcgttatggatccacctaatttg
aaagccattgatttatcacttgaattattgagaacattaaatgctttagacaacgacgaa
catttgacacctcttggatatcatttggcacaacttcctcttgatcctaggactggtaaa
atgattatatgggcagcactgttttcttgcgtagatccagtattttctatagcagcgagt
cttactttcaaagatgccttttattgtcctttgggaaaagaagagaaagcaatggaaaaa
aaattagaactcagtatgtggcaatacagcgatcacattgctctagccgaagctcttagg
agattcgaaattaatcataactttggtttttgttatcaatattttttgtcctacaatact
ttaaatcttctttccgaaatgaaacgtcaatttgctcagcacttatgtggaatgaaattt
ttaaatagcgatgatccaatagacgaaaatgctaatagaaattctaataatatagcattg
atcaaagctatagtttgtgtaggattatatccaaatatagcaaccatcaaacatggaggt
gattttaagcgtggcgtaattgcttggacacccgaagatggtactgtcaaagtacacccc
tcaagcgtcaataataaaatgaaggattttccaagtccttttttgacatattttacaaag
caacgatctaccgctatttatttacacgatacgtcttgcgtcacagctccgatattacta
tttgcaggatctaatagttttattcaaagaacaaggcaggggttcgtaataacgttaaac
acttcgctaagttttttatgtgatccgagaaccgccatacttatacaggatcttcgaacg
ataataaataatttattagaatataaaatttctcatcctggtacagtgaattgggataat
caagaaggacaaatacttaacgctctcatagaatttgtatcacaaacggacgaagaaatg
ggtttcggtaaattgaacggttaa
DBGET
integrated database retrieval system
