Polistes canadensis: 106785321
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Entry
106785321 CDS
T05611
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
pcf
Polistes canadensis
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106785321
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106785321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
Mad3_BUB1_I
TMV_coat
TetR_C_34
Cnd1
Motif
Other DBs
NCBI-GeneID:
106785321
NCBI-ProteinID:
XP_014601162
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MSLFPAYSNENVTESINNNVSQQSDNASTNWLTNSSFQTCIQSETLVVDISSENSSNDFS
ISTEVPISNTSTQEDKHSYYNSIESIKLSEDRKKLSKRTRKRKKERRSSGRKKVKHEYAR
DVANIYFEDKHRDKLFGTVRTLCSRVRPYYNVGQKYLGFVSYKKIKKNTYQRYHAYNIDA
TEKTKNKDKREIAKNDTTSKNEEMSSWCTNLEEEQTSKTREYNEKLMEDPKNVKLWLEYI
EFQDTLAKFQKNQLTKNIQRSTVLRKLSIVEKAIEQNVDCTELLKLKLRFMGEISPADEF
SKEMETLVNKDTGNIILWQALIMATQGSVAICTVPKVLDLYTKCFCILRQRSRTNPRIYD
KRLLEMLYQCLIFLRHTGLWEQMWETTRLNLILNLNLNRDSLVFKKIIDEKKLIGMEEVV
LMSRLPLNQLWLRTELLRENCHWISVSKEELELVGDSRRFVIPEDVADFVHPIISRDSNF
RMAIYSLLVLKVPLLPTRDCMLKDLGLKEFSWGVDSSEVLFPFAYPIVGEMAGHKKRKAL
IHGILEGHLISGPQYLKFHPAQEPYLDFIRETFHTIADSLSSLERSNIYVWWLRFERLLV
FLNKDDPLKYDNKGKKMKSMLKEFLKKDVNRNNLHFYKEYALIEREMGKFESCINILETA
IQSNCTLSIISDPEEKAALFNLYRTLFETLLNTETYKEAHKEKILNVIKHMIPESTDNQL
LLVEKYLKDSVNDFLKIEHKSENKDTFFLSNIYCDVIVCYTLFLYVKDSNINEIINIYKC
CIENCKELSHLQEMLYESELAILQLHYENFPDVNNNVNKTLDNMLELYPDNFYALSIYAN
KQSELPSWKFNNKKSDLTIWKALSLCLAGRKRTQFLMQLGHDAAYASLNKLLSLHRIFAR
TPEIKSCPLLWRIYMLLLREYNLCEKKGEEVYHESVVLCPWARSIYIDAAEVAPQLLTQI
QDVIREKELRMHVTPEELNILRGHL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtttcctgcttattcaaatgaaaatgtaactgaatcaataaacaataatgtt
tcacaacaatcagataatgcatcaacaaactggttaacaaattccagttttcaaacatgc
atacaatcagaaacacttgtagtagatatttcttcagagaattcatcgaatgatttctct
atttccaccgaggttcctatttccaatacatctactcaagaagataaacattcctattat
aattccattgaatcgattaagttaagcgaggataggaaaaaactatctaaacgtacaaga
aaacgtaaaaaagaacgaagatcaagcggcagaaagaaagttaaacatgaatatgcacga
gatgttgctaacatatattttgaagacaaacatcgagataaattattcggtacagtgaga
acgctatgttctagagttagaccatattataatgtcggacaaaagtatcttggctttgtt
tcttataagaaaattaagaaaaatacttatcaaagatatcatgcgtataacattgatgca
acagaaaaaactaaaaataaagataaaagggaaatcgcaaagaatgacacaacaagtaaa
aatgaagaaatgtcatcttggtgtacaaatttggaagaagagcaaacatccaagacacga
gaatacaatgaaaagttaatggaagaccctaagaacgtaaagctgtggttagagtacata
gaatttcaggacactctagctaaatttcaaaaaaatcaattaaccaagaatattcaacgt
tcaacagttttaaggaagttgtcaatcgtcgagaaagccatagaacaaaatgtagattgt
accgaattgttaaagttaaagttgcgttttatgggagaaatatcacctgctgatgaattt
tctaaagagatggaaacattagttaataaggacacgggaaatattattttatggcaagcg
ttaattatggctacgcaaggttcagtagcaatatgtacagttcctaaagttttagattta
tatactaaatgtttttgtatattaagacaacgatctcgtacaaatccacgtatttacgat
aaacgattattagaaatgctataccagtgcttaatttttttaagacatactggtttatgg
gaacaaatgtgggaaacaacacgtttaaatctcatattgaatcttaatttgaatagagat
agcttggtttttaaaaaaattattgacgaaaagaagctaattggaatggaagaagttgta
ctaatgtcaagattaccgttaaatcaattatggttaagaacagaattgttaagagaaaat
tgtcattggattagtgttagcaaagaagaattagaattagttggagattcccgtagattc
gtcataccggaagatgttgctgattttgtacatccaataattagtcgtgattcgaatttt
cgtatggcaatttatagtcttttagttttaaaagtaccattgttaccaacaagagattgc
atgttgaaggatctaggtttgaaagaattttcatggggtgtggattcttcagaagtatta
tttccatttgcatatccaatagtaggagagatggctggtcataaaaaaaggaaagctttg
atacatggaatactcgaaggacatttaatatctggacctcaatatcttaaatttcatcct
gcacaagaaccatacttagattttatacgtgaaacatttcatacaatcgctgatagttta
tcgtcccttgaacgtagtaatatatacgtatggtggttgagatttgaaagattacttgtt
tttcttaacaaagatgatcctttaaaatacgataataaagggaaaaaaatgaaatctatg
ttgaaagaatttttgaagaaagatgttaacagaaataacttacatttttataaagaatat
gctttaatagaacgagaaatgggtaaatttgaaagctgtattaatattttagagacagct
atacaatctaattgtactctgtctataatatcagatcccgaagaaaaggctgctttattt
aatttatacaggacactttttgaaactttattaaatactgagacgtataaagaagcacac
aaagaaaagatattgaatgtcattaagcatatgataccggaatcaactgacaatcaatta
ttacttgtcgagaaatacttgaaagattctgtcaatgattttttgaagatagaacataag
agtgaaaataaagatacatttttcttatcaaatatatattgtgatgtaatcgtatgttat
acgttatttttgtatgtaaaagatagtaatatcaatgaaataatcaatatatataaatgt
tgtatagaaaattgcaaagaattatcccatttacaggaaatgttatatgaaagtgagctt
gcaattttacaattgcattatgaaaattttcctgatgtgaataataatgtaaataaaacg
ttggacaatatgttagaattatatccggataacttttatgcgctgtctatttatgccaat
aaacagagtgaattgccaagttggaaatttaacaataaaaaatcagatctaacgatttgg
aaagctttatccttgtgtttagctggacgtaagcgaacacaatttttaatgcagcttggt
catgatgcagcttatgcgtcgcttaacaaattattatcgcttcatagaatatttgcaaga
acaccagaaataaaatcctgtccactcttatggagaatatacatgcttcttcttcgagag
tataatttgtgcgagaaaaaaggagaagaagtttatcatgaaagtgtagtattgtgtcct
tgggcgagaagtatttatatcgatgcggctgaagtcgcaccgcaacttttaacgcaaata
caagatgtgatacgtgaaaaagaattacgaatgcacgttacaccagaagaattaaatatt
ttacgtggccatttataa
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