Polistes canadensis: 106785393
Help
Entry
106785393 CDS
T05611
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcf
Polistes canadensis
Pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106785393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcf03041
]
106785393
03009 Ribosome biogenesis [BR:
pcf03009
]
106785393
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106785393
Spliceosome [BR:
pcf03041
]
Complex A
U1 snRNP components
U1 related factors
106785393
Complex B
106785393
Ribosome biogenesis [BR:
pcf03009
]
Eukaryotic type
Pre-60S particles
Helicases
106785393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
106785393
NCBI-ProteinID:
XP_014601296
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MYNRDRDQGRSRRGGGGRGSNRGSSDNGRGNLNSRYNGRGRGSSVSTGRGGLKGKQPGGS
LRKVNWDARSLEPLRKDFYIEHPAVRNRSKEEVAQFRENAEITVKGVNVPNPIQYFEEGN
FPPYVMEGIRRQGYSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP
RLSKGDGPIALILAPTRELAQQIQEVANCFGESAAVRNTCIFGGAPKGPQAHDLERGVEI
CIATPGRLIDFLERETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRALAEDFLTDYTHLNIGSLTLSANHNIVQIVDVCQEFEKDIKLYRLLQEIGTEK
ENKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVATDV
AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL
REAGQNINPRLSEMAEMAKSGNFGNRSVFLCAKRFSSSSGSVDRTGGRRGNIDCRGGRGS
GTLRGRGSIRSSSSYPSGSSGYSGSDYTNYNNLKQNNSISPNTGYGYTTQRNYSQNMSQV
YGDSDNYGNNYQYRGATY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtataacagagacagagatcaaggcagaagtcgtagaggaggtggtggtagaggaagt
aacagaggaagtagtgacaatggtcgaggaaatcttaatagtcgatataatggcagagga
agaggaagtagtgttagtactggacggggtgggctaaagggtaaacaacctggaggaagt
ttaaggaaagtaaattgggatgctcgctctttagaaccattgcgtaaggatttttatata
gaacatcctgctgtcagaaacaggtctaaagaagaagttgcacaattccgtgaaaatgct
gaaataactgtaaaaggagttaatgttcctaatcctattcagtattttgaggaaggtaat
tttccaccttatgtaatggaaggaattcgcaggcaaggatattcacaacctacagcaatt
caagcacaaggatggccaatagcacttagtgggagagatcttgttgcaattgcacaaact
ggctctgggaaaacacttggatatattttacctgcaattgtgcatattatacatcaacca
cgcttaagtaaaggagatggtccaattgcattgatattggctccgacaagagagcttgca
caacagattcaagaagtagctaactgttttggtgaatctgcggctgtaagaaatacatgt
atttttggtggtgcgcctaaaggaccacaagctcatgatttagaaagaggtgttgaaata
tgcattgctacaccaggtagacttattgactttttggagagagaaactacaaatttgcgc
agatgcacttatttagtgcttgatgaagctgatagaatgctagacatgggctttgaacct
caaattcgtaaaattattgaacaaatacgacctgacaggcaggtgttaatgtggtctgca
acatggcctaaggaagttcgagctttggctgaagattttctgaccgattacacccatctt
aatataggatcgttaactttatcagccaatcataacattgtacaaattgtagatgtttgt
caagaatttgagaaagacattaaattatataggctacttcaagaaattggaactgaaaaa
gaaaacaaaacaataatattcgtagaaactaaacgaaaagttgacgacattacaagaaat
attagaagagatggatggcaagctttgagcattcatggtgataaaaatcaacaagaaaga
gatcatgtgttgcaggaatttcgtagcgggcgagcaccgattttggttgcaacagacgta
gctgcaagaggtctagatgtggatgatgtcaaatatgtgataaattttgactacccatca
tcatcagaggactatatacatagaattggtcgtactggacgcagacgacaaacaggaaca
gcttatgcattttttacaagtcataatatgaaacatgcaggagatctaatagaagtatta
cgagaagctggacaaaatattaatccaagattgagtgaaatggcagaaatggccaaatca
ggaaattttggaaacagaagtgtgtttttatgtgctaaacgtttctccagttcatctgga
agtgtagatagaactggcggaagacgtggaaatattgattgtagaggagggcggggtagt
ggtacccttagaggacgaggaagtattcgttctagcagttcttatccatctggatcaagc
ggttattcaggatcagactatactaattataataacttaaagcaaaacaattcaattagt
ccaaatactggttatggatatactacacagagaaactatagtcaaaatatgtctcaagtt
tatggagatagcgataattatggaaataattatcaatatagaggtgctacatattaa
DBGET
integrated database retrieval system
