Polistes canadensis: 106785506
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Entry
106785506 CDS
T05611
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pcf
Polistes canadensis
Pathway
pcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106785506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcf03009
]
106785506
Ribosome biogenesis [BR:
pcf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106785506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_1st
Utp13
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WD_LRWD1
VPS8_N
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_Vps41
Utp12
IL31
Motif
Other DBs
NCBI-GeneID:
106785506
NCBI-ProteinID:
XP_014601580
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MNKNILKEAFEVNSIHDASYTGGQIHWSKNGKYMFCSNNGAISVLSIEKGSTIEYFGKAE
DREDLDEVNCFSLSNDDKFILAHCRSGFFKLWDIQEHKLIKIWKSIHNGPVTNLTFLNNQ
LMASGGSDSSIRLWDLQHHICLRLFKGIQGVISVLAFHPYKEKLLFGAGDDTKIYGWDSD
TAQQKILLSGHSSKITSLSFHVNGINLVSSGRDKLIILWDISTSNALRKLAVYEGIEGAF
IVQNKHLSSNFLTTDANSIYVAAAGEKGLVTLWDIFNCTKLYIQENSLVAAAKEEGGVSI
THLIYNEDINSFAVVSADHHIIIYSMENFGCMKQIVGYLDSILDIAYVGEEDSHIAVASN
SSDIKLYELNSMNCQLLRGHTDIVLSLATTPANRQLLISSAKDNSVRVWLLDKETKKMIC
TAAAIKHTASVGCVCISQLSTKFFVSASQDSCLKLWSLPENLATSSDHIKIESTNTVLAH
VKDINSVAISLNDEFIATGSQDKTAKLWSANDLKLIGTFNGHRKGVWSVRFSPIDRVLLT
ASADCTIKIWLLNDLTCLKTLQGHESSVLKAEFMSCGMQLITAGADGLIKIWSMKTSECT
FTLAKHESRVWGLTVSKDEKHIISGGSDSLLIIWKDVTEERKTRIAAGKETNVLKKQKLD
NLLKSNNFSQALKIALELEQPLLLLNIVDGILKEDKKQLQTTIRELPPSCKQVLLRYAAK
WNTNSKNAEAAQTVINALICEMEMQDIQSTDLLPFFEGMIPYTERHFKRLTEHLKDVHSI
IYTINRMKPHVAICSSNVDSDV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatatcttgaaagaagcttttgaagtaaattctatccatgatgctagttat
acaggaggccagattcattggagtaaaaacgggaagtatatgttttgctctaacaatgga
gctatatcggttttatcgatagaaaaaggttctacgattgaatattttggaaaagcagaa
gatagagaagaccttgatgaagttaattgtttttcactaagcaatgatgataaatttata
ctcgctcattgtaggagcggattttttaaactgtgggatattcaagaacataagttaatt
aaaatatggaaatctattcacaatgggcctgttacaaatttaacttttctaaataatcaa
ttgatggcctcaggaggaagtgatagttctatcagattatgggatttacaacaccatatt
tgtctaaggctttttaaggggatacaaggagttattagcgtgttagcttttcatccatat
aaagagaaattactgtttggggccggagatgatacaaaaatttatggctgggatagtgat
accgctcaacaaaagattttactttctggtcattcaagtaaaataacatccttatctttt
catgttaatgggatcaacttagtcagttccggaagagataaattaattatattgtgggat
atctctacttcaaacgcattacgcaaattagcagtttacgaaggaatagaaggagctttt
attgtgcaaaataaacatttgtcaagcaatttccttacaactgatgcaaattctatttac
gttgctgccgctggtgaaaaaggtctcgttactctatgggatattttcaattgtacaaaa
ttatatatacaagaaaactctttggtggctgcggccaaagaggaaggaggagtttcgatt
acgcatttaatttataacgaagatattaatagctttgctgtagtttctgcagatcatcat
attatcatttattctatggaaaactttggctgtatgaaacagattgtgggttacttagac
tccattttagacatagcctatgtaggagaggaggattcacatattgcggtagctagtaat
agttcggatattaaattatatgaattaaattctatgaattgccaattacttcgtggtcat
actgacatagttttatcacttgctacgactcctgccaataggcagttattaatttcttca
gctaaggataatagtgttcgagtatggcttttggataaggaaaccaaaaaaatgatatgt
actgccgctgctattaaacatacagcttccgttggttgtgtttgtatttcacaattatca
accaaattttttgtatcggcaagtcaggattcatgtcttaaactttggtctttacctgaa
aatttggcaacatcatcggaccatattaaaatcgagtcaactaatacagtattagctcat
gtgaaagatattaatagtgtagcaatttcattgaatgatgaatttattgcaactggttca
caagataaaactgctaaattatggtctgccaatgatcttaaattgattggtacatttaac
ggacatcggaaaggtgtatggagcgtacgattttcaccaattgatagagtgttattgaca
gcatctgcagattgcacgattaagatatggttattaaatgaccttacatgtttaaaaact
ttacagggacatgagtcatctgtcctgaaagctgaatttatgtcttgtggtatgcaattg
atcactgcaggtgcagatggtcttataaaaatttggagtatgaaaacatccgaatgtact
tttactttggcaaaacatgagagtagagtgtggggattaacagtttctaaagacgagaaa
catattattagcggtggaagtgattctttattgataatttggaaagacgtaacagaggag
cgaaaaactcgaattgcagctggaaaagaaacaaatgtattaaagaaacaaaaattagat
aatttacttaaatcaaataatttttcccaagcattaaaaattgctttagaattggaacaa
ccactactacttttaaatattgttgatggtatattaaaagaagataaaaaacaattacaa
actacaatacgtgaattaccaccttcttgtaagcaagttttattacgttatgcagctaaa
tggaatactaacagcaaaaacgcagaagctgctcagacggttataaatgcgttaatttgc
gaaatggaaatgcaagatattcaaagcacagatctattgcctttctttgaaggtatgata
ccttatacggaacgccattttaaaagattaacggaacatttaaaagatgttcattccatt
atttacactattaacaggatgaaaccacatgttgcaatatgtagttcaaatgtagatagt
gatgtatag
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