Polistes canadensis: 106785577
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Entry
106785577 CDS
T05611
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106785577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106785577
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106785577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
106785577
NCBI-ProteinID:
XP_014601673
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MDSQYKIIHPVKYLHDHLAQNIRPDGRQFLSFRPISVNVSSITQADSSAIFKIGNTTVIC
GIKAELSAPKAETPDKGFIIPNVELSPLCSPKFRPGPPSEEAQVISQLVEDILTNSATID
LRSLCICEDKLVWVLYCDLLCINYDGAVVDACTGALACALKSLTLPRVTYDPLNGNTCVQ
HEDRISLQIKTIPVSTTFAIFDGQLLIADPTDDEESLSLGKLIIVSDEEAICCVHKPGGI
PVSKDLFIKSLEKSKRRAELVRSLINTAMITVVKNKSNILDENAMEISK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaatacaaaataattcatcctgtaaaatatctacatgaccatctggcccaa
aatataagaccagatggaagacaatttttatcctttcgtccaataagcgttaatgtatct
tcaataactcaagctgatagttcagcgatatttaaaataggaaatactacagtaatttgt
ggtatcaaagctgaattgtcagcacccaaagcggaaacccctgacaaaggttttatcata
cccaatgttgaactttctccattatgttctcccaaatttcgtccaggtccaccaagtgaa
gaagctcaggttatttctcaattggtagaagatattttaactaattctgctacaatagat
cttagaagtttgtgtatttgtgaagataaattagtatgggtattatattgtgatcttttg
tgtatcaattatgacggtgcagttgtagatgcctgtactggtgcattagcatgtgctctt
aaatctttaaccttaccacgagtaacttatgatccactcaacggaaatacttgtgtacaa
catgaagatagaatttcattacaaatcaaaactatacctgttagcacaacttttgctatt
tttgatgggcaacttttaattgctgatccaacagatgatgaagaaagcttatcgttagga
aaattaataatagtgtcagacgaagaagcaatatgttgtgtgcataaaccaggtggtatt
ccagtatcaaaagatttatttataaaaagtttagaaaaatctaaacgaagagccgagtta
gtgcgatcattgataaatactgctatgataacagtagtaaaaaataagtcgaatatatta
gatgaaaatgctatggaaataagtaaatga
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