Polistes canadensis: 106785997
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Entry
106785997 CDS
T05611
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
pcf
Polistes canadensis
Pathway
pcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106785997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106785997
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106785997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF3347
Motif
Other DBs
NCBI-GeneID:
106785997
NCBI-ProteinID:
XP_014602417
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSSCTDPLHLNEIPLFKELKRNLSGNINETHNILEIRDDVLYVWNADKCCIQTLNVGATR
GKFDEDITYQDPFQTLQPTDPPIFEVMNISINETATQVAIWGILGIAIIELPKRWGKDSA
FQGGKEIILCASHCFGDFGATTEIRKARWHPGSTNDSHLLVLTSENIFRLYECEINGAPK
LIKSWKVGRSPITGSRSKVPNFASLGDMAVDFDFATPTLRKPELFAGQTINEAKNSVDWN
QIEWPILVLRGNGEVLIVRENILCDNHDKPVIYGSLSMYPESDDNYGIDSCSIMCIQTTP
PIVVIAMCNGKIYHAILLKETMDENEEDKKTWSQYGSSYSLHTPDDALYIFECIEMELGL
FFTDDDKKYNCPIYVHNDKGNKSRYFCSHNAGIHMVSLPMVSQLDDYVNNTNEKIEDSFL
PSLSNESSSHYLICTRTKHTEIDESTPILGFGLIQEPCVLIALLHTGDVVNLSVVDPHYL
PRVDLPEPIVTSAQKVNKESFDVYIKKLLKNETSQPITKLGKRSMTIKECVELLFHVTQI
FRRQHFVRQDKAREEINKKIRALKALKTHLLKETDTLMETKKELQQTAERLAERYEDIKD
KQEELARRAEEVLRLVNYKEPSMSPTERAEAEELRRMNDKIQDLRVRLKQLKKKANQQSM
LMENTEIIEKQKEIIFSKNQVEAIRENLAKMTKDIKNMVVQVKKLEEEVGM
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttgtaccgatccgttgcacttaaacgaaattccgttattcaaggagcttaaa
cgaaatttgtccggtaatatcaacgaaactcataatattctggagattcgagatgacgtg
ttatatgtgtggaatgccgataagtgttgtattcaaacattaaatgtcggcgctacgcgt
ggtaaatttgacgaagatattacatatcaggatccgtttcagacccttcaaccgacagat
ccaccaatcttcgaggttatgaatatatccatcaatgaaacggccacccaagttgctata
tggggtattctgggaattgctatcatagagttacctaaacgttggggcaaggattctgca
tttcaaggaggaaaggaaatcattttatgcgcgagccattgtttcggagacttcggtgcg
actactgaaattcggaaagcaagatggcatcctggatcaaccaatgattcacatctcttg
gttcttacttctgagaatatctttcgtttatacgaatgcgaaatcaatggtgcaccaaaa
cttatcaaaagttggaaagtaggacgtagtccaataactggctcgcgatctaaggtacct
aattttgcatccctcggtgatatggctgtggattttgactttgctaccccaaccctaaga
aaacctgaactttttgccggtcaaactataaatgaggctaaaaattccgtcgattggaat
caaatcgaatggcccattctcgtacttcgtggaaatggagaggttcttatcgtacgagaa
aatattctttgtgataatcacgacaagcctgtaatttatggttcgttatctatgtatcct
gaatctgatgataattacggaatagattcgtgttccataatgtgcatacaaactactcca
ccgatagttgtaattgcgatgtgtaatggaaaaatataccatgctatattattgaaagaa
acaatggatgaaaacgaggaggataaaaagacctggtcgcagtatggttcttcatacagt
ttacatacacccgatgatgcactttatatctttgaatgtatcgaaatggaacttgggcta
ttttttaccgacgatgacaaaaagtacaactgcccaatatacgtgcataatgataagggt
aacaaatccagatacttttgttctcacaatgctggaattcatatggttagcctaccaatg
gtatcacagttagatgattatgtcaataatacgaatgaaaaaatagaagatagtttttta
ccgtcattatcaaatgaatcgagttcgcattatttaatttgtacaagaaccaagcatact
gaaatcgatgagtccacaccaattttgggatttggtctaattcaagaaccgtgtgttcta
atcgcattacttcataccggtgatgtcgttaatctttccgtagttgatcctcattatctt
ccacgtgtcgacttacctgaacctatagtaacttcagcacagaaagtgaacaaagaatcg
tttgacgtgtacattaaaaaattattgaaaaacgaaacgtcacaaccaattacgaaactt
ggaaaacgatcgatgactataaaggaatgtgtagaactcttgttccacgttactcaaata
tttcgccgtcaacatttcgtacgacaagataaagctcgcgaagaaataaataaaaagata
cgagcattgaaggcattgaaaacgcatttattgaaagaaaccgatactttaatggaaacg
aaaaaagaacttcaacaaacggctgaacgtttggctgaacgttacgaagatattaaagac
aagcaagaagaattagcacgcagagcagaagaagtactgagattagttaactacaaggaa
ccttcaatgagtcccaccgaaagagctgaagctgaagaattgagaagaatgaacgataaa
atccaagatttacgtgtgcgattgaaacaattaaaaaagaaagcaaaccaacaatcgatg
ttaatggaaaatactgagattattgaaaaacaaaaggaaataatatttagtaagaatcaa
gtggaagctattcgagaaaatttagctaaaatgactaaggatattaaaaatatggtagtc
caagtaaagaaacttgaagaagaggtaggaatgtga
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