KEGG   Polistes canadensis: 106786286
Entry
106786286         CDS       T05611                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
pcf  Polistes canadensis
Pathway
pcf03013  Nucleocytoplasmic transport
pcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106786286
  09122 Translation
   03013 Nucleocytoplasmic transport
    106786286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcf03019]
    106786286
   03041 Spliceosome [BR:pcf03041]
    106786286
Messenger RNA biogenesis [BR:pcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106786286
Spliceosome [BR:pcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106786286
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 NBCH_WD40 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st EIF3I Beta-prop_ACSF4 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT140_2nd Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP CBM_20 DUF2202
Other DBs
NCBI-GeneID: 106786286
NCBI-ProteinID: XP_014602976
LinkDB
Position
Unknown
AA seq 328 aa
MFNQKLFYNTVLSQTFSSDGNYLAAGNIYGDVSIFDLTKVLTPHKIEENELQGPNYHLTA
YPDQHIQSMVSTDNFLITGTVGEISGWDWKVVASSKAAKSKPSWVIQIPANKDSYEKADV
NFLVYSKSNNILYAGCGDNNIYVISLEEGKILRNLPGHTDFIHCLSLAGNQLASSSEDGS
VRLWDLRKKENTNILNPHMVDKVSRPKFGKWIGAVDLTEDWLLCGGGPNLSLWHMRTMEP
ATVFDLADQGIHVAHIYEERIIAAGAVPHVYHLTYQGETLAKVPTSSNTVYSTIYQEIPQ
KVLSIAGSSNNLDLCTNFNYREMTLKFA
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtttaatcaaaaattattttataatactgtattatcgcaaacattttcttccgatgga
aattatctcgccgctggaaatatttacggtgatgtttctatatttgatttaactaaagtt
ctgacaccgcacaaaattgaagaaaatgaattgcaaggacctaactatcatttgactgcg
tatcctgatcaacacattcaaagtatggttagtacggataactttttaattactggtaca
gttggtgaaatatctggatgggattggaaagtggttgcttctagtaaagctgctaagagc
aaaccttcgtgggttattcaaattccagcaaacaaagatagttacgagaaggcagatgtc
aatttcttagtgtactctaaatcaaataatattttatatgccggttgcggtgacaataat
atttatgttataagtttagaagaaggaaaaatacttaggaatttacctggtcacacagac
tttatacattgtctatccttagcaggtaatcaacttgcatcgagtagcgaggatggatcg
gttaggttgtgggacttgcgaaaaaaagaaaatacaaatatcttgaatccgcatatggta
gataaagtatcacgtccaaagtttggtaaatggataggtgctgttgatttgaccgaagat
tggttgctatgcggtggggggcctaatttatctttgtggcatatgcgtacgatggaacct
gccacagtatttgatcttgccgatcaaggaattcatgttgctcatatctacgaagagcgt
atcatagcagctggtgcagtgcctcatgtatatcacttaacttatcaaggagaaacatta
gctaaagtgccaacgtcgagtaatacagtttattctactatttatcaagaaataccacag
aaggtgctaagtatagcaggctcctccaacaatcttgatttatgtacaaactttaattac
agggaaatgactttaaaatttgcttaa

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