Polistes canadensis: 106786388
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Entry
106786388 CDS
T05611
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pcf
Polistes canadensis
Pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106786388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcf03041
]
106786388
03009 Ribosome biogenesis [BR:
pcf03009
]
106786388
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106786388
Spliceosome [BR:
pcf03041
]
Complex A
U2 snRNP components
U2 related factors
106786388
Complex B
106786388
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106786388
Ribosome biogenesis [BR:
pcf03009
]
Eukaryotic type
90S particles
Helicases
106786388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
ResIII
AAA_25
AAA_7
Flavi_DEAD
T2SSE
Motif
Other DBs
NCBI-GeneID:
106786388
NCBI-ProteinID:
XP_014603189
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSKRRIDVVDPYIKRRTIGSSSNNVPATPTDPKNQVQINPYNGLPYTPRYHEFYKKRITL
PVFEYRVDFMRLLANHQCIVLVGETGSGKTTQIPQWCVEYSRCIGAKGVACTSPRRVAAM
SVAQRVSEEMDVCLGQEVGYSIRFEDCSSSKTMLKYMTDGMLLREGMSDPMLEAYQVILL
DEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPV
EIFYTPEPERDYLEAAIRTVIQIHVCEEVSGDLLLFLTGQEEIEEACKRIKREMDNLGPE
VGELKCIPLYSTLPPNLQQRIFEPAPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDP
GFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQDNTY
PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLG
AVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMRFAH
IDGDHLTLLNVYHAFKQNLEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFALQRTSTD
FTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSTCLDHKPEWVIYNEF
VLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQAKLDSKQYQEGF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgtaggattgatgttgttgacccttatatcaaaagaagaacgattggatca
tcatccaacaatgtgcctgcaactccaactgacccaaaaaatcaagttcaaattaatcca
tacaatggactaccttatacgccacggtatcatgaattttataaaaagaggataacacta
cctgtgtttgaatatcgtgttgatttcatgaggcttttagcaaatcatcagtgtatagtg
cttgtaggagaaacaggctcaggaaaaacaacacagataccacagtggtgtgtagagtat
tcaagatgtataggagccaagggcgtagcatgtacttcaccaagaagagtagcagcaatg
tctgttgctcaaagagtttcagaagaaatggatgtttgtttaggtcaggaagttggatat
agtatccgttttgaagattgtagttcttcaaagaccatgttgaaatatatgacggatggt
atgcttctacgtgaaggcatgtctgatcctatgctcgaagcatatcaagtaattttactt
gatgaagctcatgaaagaactttagctactgatttacttatgggtgttttaaaagaagtg
attaagcaaagaccagatttaaagcttgttattatgagtgcaactttagatgctggaaag
ttccaacagtattttgataatgcgccacttatgaatgtacctggtaggacgcatccagtt
gaaattttttatacgccagaaccagaaagagattatttagaagctgctattagaacagtt
atccaaatacatgtgtgcgaagaagtgagtggggacttacttttatttttaactggccaa
gaggagattgaagaagcctgcaaaagaatcaaaagagaaatggacaatttaggtcccgaa
gttggtgaacttaaatgtattccactgtattcaacattacctccaaatcttcaacaaagg
atttttgaacctgctcctccaaacaaacctaatggtgctataggtcgaaaagttgtagta
tcaactaatatagcagaaacatcgttaacaatagacggtgttgtctttgtaattgatcct
ggttttgccaaacagaaggtttataaccccaggattcgtgtagagtcacttcttgtatct
ccaattagtaaagcttctgcgcagcagcgtgccggtcgtgccggccgcacacgtccaggg
aaatgctttaggctatacacagaaaaggcatataaaaatgaaatgcaagataacacttat
ccagaaattttgcgatctaatcttggtagcgttgtactgcaactgaaaaagttgggcata
gatgatttggtacattttgattttatggatccaccagcacctgaaactttaatgagagca
ttagagcttcttaactatttggcagctctcgatgatgatggaaatttaacagatcttgga
gcagtaatggcagaattcccattggatccacaactagccaaaatgttaattgcttcttgc
aatcacaattgtagcaatgaaatacttagcattactgctatgctttcagtcccacagtgt
tttgtgaggccgaatgaatcaaagaaggcagctgatgatgccaaaatgagatttgcgcac
atcgatggtgatcacttaacattactcaatgtctaccatgcatttaaacaaaatttggaa
gatccacaatggtgttatgataattttgttaattaccgatctttgaaaagtggagataat
gtcagacagcaattaagtagaataatggataggtttgctttgcaacgcacttctactgat
tttacatcgaaagattattatataaatatcaggaaagcccttgttaatggtttctttatg
caggtggctcatttagaaagaacaggccattatttaacaattaaagataatcaaattgtc
cagctacatccaagtacttgtttggatcacaaaccagaatgggtgatttataatgaattt
gtactcacaaccaaaaattatattagaacagtaactgatattaaacccgactggttactg
aagatagcaccacaatattatgatttacaaaactttcctcaatgtgaagctaagaggcaa
ttagaagttattcaagcaaaactagattcgaaacagtatcaagaaggattctaa
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