Polistes canadensis: 106786834
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Entry
106786834 CDS
T05611
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pcf
Polistes canadensis
Pathway
pcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106786834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106786834
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106786834
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106786834
RNA polymerase I system
106786834
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106786834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW7_SPT5
KOW6_SPT5
KOW2_Spt5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
SH3_KIN17_C
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
106786834
NCBI-ProteinID:
XP_014604143
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MSESEGSNFSDNESDHGGRGSESEQEENRSVSRSRSPSRSPSRSPSRSRSRSRSGSGSED
GDDKADEAEEVRSDEEEVVEPEDEPEGEDLDGSSEYDEEEEEDDDRPRKKKKKDRFGGFI
IDEAEVDDEVEDDEEWEEGAQEIGIVGNEVDELGPTAREIEGRRRGTNLWDSQKEDEIEE
YLRKKYADESAAARHFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKATALLLMR
KFITYQFSGEPLQIKSVVVPEGVKGYIYIEAYKQPHIKAAIENVGNLRMGIWKQQMVPIK
EMTDVLRVVKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRG
ALRTAQSESEALKRKKKRRPPAKPFNPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKN
FTTSAIVAEGVKPSLSELERFEEAPEGVEIDLSGAPATGTPAGKEDQAVTHSFSNGDNVE
VCEGELINLQGKIVSIDGNLIMVMPKHEELKDALEFRSCELRKYFVMGDHVKVVAGRYEG
DTGLIVRVEPNRIVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTV
GVIVRLERENFHVLSMHGKVIEARPQGLTKRRENRNAVALDSQQNPIQKKDIVKVVDGPH
AGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSGVTSMSPISGFMSPRI
ASPMHPSGGGMGRGGGGGGRGRGRGGGTRRDRELIGTTIKITGGPYKGNVGIVKDATENT
ARVELHSTCQTISVDRSHIANVGVPTKDGGFSSYSRTPAYTAGGQTPMYARDGSKTPMHG
SQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPTITNTPARTNDFDGYGMEEAGSPG
YVSGYPSTGGPFTPQTPGTMYGSEQSFSTYQPSPSPAGSATASPSPAGYVATPSPSGTGY
TTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGSGLDAGSGSGMINNTEWHTTDIEVRI
RDSHPDPALVGQQGIIRGISAGMCAVFLPVEDRVVNLVCDQLEPVVPSRGDRVKVIVGEE
REAVGTLLSIDNQEGVVKLNTDEVKMLHLRFLCKMKSS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcagagggaagtaatttttccgataatgaaagtgatcatggtggtagaggt
agtgaaagcgaacaggaagaaaatcgtagcgtttctcgtagcagaagtccttccagatca
ccttctaggagtccttcaaggtctcgatcacgttctagatcaggatccgggtcagaagat
ggagacgataaagctgacgaagctgaagaagttagatccgacgaagaagaggttgtggaa
ccagaagatgaaccagaaggtgaagatctggatggcagtagcgaatacgatgaagaagaa
gaagaagatgatgataggcctagaaagaaaaagaaaaaagatagatttggtggatttatc
attgatgaagctgaagtagatgatgaagttgaagatgacgaagaatgggaggaaggagct
caagaaattggtatcgtagggaatgaagtggatgaattaggacctactgcgagagaaatt
gaaggaagacgtagaggcactaatctttgggactctcagaaagaagatgaaatagaagaa
tatttgaggaaaaagtacgcagatgaatctgcagctgctcgtcacttcggtgatggtggt
gaagaaatgagcgatgaaataactcaacaaactttacttcctggagttaaagatcctaat
ctttggatggtcaaatgtcgtattggagaagaaaaagcaacagcgcttttattgatgcga
aagtttattacatatcaattttctggggaaccgcttcaaattaaatcagttgttgtaccg
gaaggcgtaaaaggttatatttatatagaagcatataaacaacctcacataaaagctgcc
atagaaaatgtaggtaatttaagaatgggaatatggaaacaacagatggtgccgattaaa
gaaatgactgatgtattaagagtcgttaaagaacagacaggattaaaggctaaacagtgg
gtccgattaaaaagaggcatttataaggatgacatagcacaagtagattacgttgatttg
gcgcaaaatcaagtgcacttaaaattattaccaagaatagattatactcggcctcgtggt
gcattgagaacagctcaaagtgaatcagaagctttgaaaagaaagaaaaagagaagacca
cctgcgaaaccatttaatcctgaagcaattcgagctattggaggtgaagttactagcgat
ggagatttcttaatttttgaagggaacagatatagtcgaaaaggatttttgtataaaaat
ttcacgacaagtgctattgtagcagaaggagttaaaccgtctctttcagaattagagaga
tttgaagaagcaccagaaggtgttgaaatagatttaagtggagctccagcaacaggaaca
cctgctggaaaagaagatcaagcggtaacacattccttcagcaatggtgataacgtagaa
gtatgtgagggtgaattgataaatttgcaaggcaaaatagtctcaatagatggaaatcta
ataatggttatgccaaaacatgaagaactgaaagatgctttagaattccgatcatgcgag
ttaaggaaatattttgttatgggtgatcatgttaaagtagttgctggaagatacgaagga
gacactggtttgattgttagagtagaaccaaacagaattgttttgttctctgatttatca
atgcacgaattggaagtgcttcccagagatttacaattatgctcggatatggcaactggt
gttgatagtttaggccagtttcagtggggtgatttagttcaacttgatgctcaaacagtt
ggcgttatagttcgtcttgaacgtgagaatttccatgttctttccatgcacggtaaagta
atcgaagcaagaccacaaggattaacgaaacgtcgagagaatagaaacgcagttgcgtta
gattcacaacaaaatccaatacaaaaaaaagacattgttaaagtagtcgatggaccacac
gcaggaagaggtggagaaataaaacatctttatagaagttttgcatttttacattcaaga
atgttcgttgataatggaggcatattcgtatgtaaaacaagacatttacaactttctggt
ggaaataaatcaggtgttacatctatgtcaccaatctcaggctttatgtcaccaagaatt
gcatctccgatgcatcccagtgggggtggaatgggccgaggtggtggtggtggtggtaga
ggtagaggtcgcggtggaggtacaagaagagacagggagttaataggaactacaataaaa
ataactggtgggccttataaaggaaacgtaggcatagttaaagatgctacagaaaatact
gcacgcgtagaactacattctacgtgtcaaacaatatctgtggatagatctcacatagca
aacgttggagtaccaacaaaagatggtggtttcagcagttacagtcgtacaccagcatat
acggctggtggacaaacaccaatgtatgcgagagatggctcgaaaactcctatgcatgga
tctcaaacacctatgtacgaaaatggttcacgtacacctcattatggctctatgactcca
tcccatgatggttcacggacacctggtcagtcaggtgcttgggatcctacaatcaccaat
acacctgcgagaacaaacgacttcgatggttatggcatggaagaagctggttcgccagga
tacgtatctggttatccttctactggtggcccgttcactcctcaaacaccaggtactatg
tatggatctgagcaaagttttagtacataccaacccagtcctagtcctgctggtagtgcg
actgcaagtccaagtcctgcaggttacgttgctacaccatcaccaagtggaactggatat
actacaagtcctcatggagcattcgctactccctcaccaatgggttacagtcctatgaca
ccaggagtagcaggaagtccttataatccacaaacaccaggatcaggtttagatgctgga
tctggttctggaatgattaataatactgaatggcacacaacagatatagaagtacgaatc
cgagattctcatccggatcctgcattagtaggacagcagggtataataagaggaatttct
gccggtatgtgcgctgtgtttctacccgtggaagacagagtcgtaaatttggtttgcgat
caattggaacctgtagtaccttcaagaggagaccgagtaaaagtaattgttggagaagaa
cgagaagctgtaggaactttactttcaatagacaatcaggaaggtgttgttaagttgaac
accgacgaagtcaaaatgttacatttacgatttttatgtaaaatgaagtcgtcctaa
DBGET
integrated database retrieval system
