Polistes canadensis: 106786936
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Entry
106786936 CDS
T05611
Name
(RefSeq) putative ATP-dependent RNA helicase me31b isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106786936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106786936
03036 Chromosome and associated proteins [BR:
pcf03036
]
106786936
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106786936
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106786936
mRNA degradation factors
5'-3' decay
Decapping complex
106786936
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106786936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
106786936
NCBI-ProteinID:
XP_014604326
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHMNSNHMLNSALNAKTELEKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMDHCKILVLDEADKLLSQDFKGMLDHVISKLPHERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVIRPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaacacatatgaattcaaaccacatgcttaattctgctctcaatgcgaaa
acagaattagaaaagatggacgatgtaggttggaaagccaaactaaaaattccaccaaag
gataaacgcataaagactagtgatgtcactgacacacgtggtaacgagtttgaagaattt
tgcctgaaacgagagttgctaatgggtatctttgaaaagggttgggaaaaaccatctcca
attcaagaagccagtatccccattgctttgtctggtaaagacatcttggctcgagctaaa
aatggtactggtaagactggagcatattcgattccagtactcgaacaggtcgaccctcga
aaagatgtaattcaagctttagtaattgtacctaccagagagttagcccttcaaacatca
caaatatgtattgaacttgcaaaacatatggatattaaagtaatggtaactaccggtggt
accaatttacgtgacgatataatgaggatttatcagaaagtacaagtaataatagcaaca
ccaggaagaattcttgatcttatggacaaaaacgttgcgaacatggatcactgcaaaata
ttagttttggatgaagcagataagcttttgtcgcaagattttaagggaatgttggatcat
gtcatttctaaattgccacacgaacgtcagattttgctatattcagccacctttccatta
actgtgaaacagtttatggaaaaacatttgcgagatccatatgagattaatttaatggaa
gaattaacattaaaaggtgtaacgcagtattatgcctttgtacaggaacgacaaaaagtt
cactgccttaacacgctattctcgaagttgcaaataacacagagcataatcttctgtaat
tcgacacaacgcgtagaattactagcaaagaaaataacggatcttggatattgctgttat
tatatacacgcgaaaatggcacaggcacacagaaatcgtgtattccacgattttcgagca
ggattatgtcggaatctggtgagcagcgatttgttcactcggggtattgacgtacaagct
gttaacgttgtaatcaattttgactttcctaagatggcagaaacgtatctgcatcgcatt
ggtcgatcaggaaggtttggccatttaggtatagcaattaatctaatcacgtatgaggat
cgttttaacttacatcgtatcgaacaagagcttggaacagaaataaaacctatccctaaa
gtgatagaccccagtttgtatgtaataagacctgaagacaataatagtatggaagagggt
aatgtgtccaagtag
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