Polistes canadensis: 106786951
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Entry
106786951 CDS
T05611
Name
(RefSeq) extensin isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
pcf
Polistes canadensis
Pathway
pcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106786951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcf03000
]
106786951
03021 Transcription machinery [BR:
pcf03021
]
106786951
03036 Chromosome and associated proteins [BR:
pcf03036
]
106786951
Transcription factors [BR:
pcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
106786951
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106786951
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106786951
PBAF complex
106786951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106786951
NCBI-ProteinID:
XP_014604347
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MALPSNYKQVSMATSNVVASNQRLRASGGSSSSSNTSKDTQSPFIQTPHSHPGFTPQKVG
KNTNADSRMPKPPKPPEKPLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEE
DKTEFIEEYEAEKVEYEKSLKTYHNSPAYLAYIAAKNRGKSALCAAQQNNDDRESHERSS
GSSKNQAAQDRRIDILPAEDDDDQDDGYSVKHVAYSRYTRNHRLINEIFSDTVVPDVRSV
VTTQRMQVLRRQVQSLTMHQKKLEAELQQIEEKFEAKKRKFIETSEVFQEELKKHCRPAV
DEETFNKMVERQYEVLRRERLRGSEENRSDGPASNESTPNSTPTPTPASLNDEPTSEATE
NETIDKKTNGFEKPNNEIKKENSSPPYVDTKTESPTVQGNQPINQHGSNSNMYCVSVSPI
QQQQPPQPQQQQPTPSSSMSLIPPQQQQPTPLPSMSLISPQQQQQQHHQQQHHQQQQQPH
QQPPVQSHQQSPPQSHQQPTPQTHQQPSQTHPQPPLQTHQQPNPQPHQQPSSQPPQLPSP
QSHQHPPPQTHQQPPPQSHQQPPPPPSHQQPPPQPQPHSQPPPPTHQPQLPQPHQQPSSQ
THQQPPPPPQSHPQPPPQTHQSPTPQSHQQPPSQPQQQPTPQPHQQPPPQPHQQPPPQSH
QQPPPQSHQQPPPQTHQQPQPQPHQQPPPPPPPPQSHQQPPPQFHPQPSPQTHQPPPPTQ
PHQQPPPQSHQQPPPQSHQQPPPPSHQPPPQPHQLPPQSHQQPSPQPSHQPPPQSHQQSQ
SQSHQQTAPPTSSQQQQSNSTTNSAVPVTVSATQNIPNMPPVSSPAPPLHNPHQQGMLSN
HSMSPHQTSQGTQGTQVLPQGPVNNPHTSPIIPPNQGYGQQYQPGPGSQPQNVPLAPRPP
HPSYTYSQQQPYHQPYPQYAHPYYHQPYSQYSPHTMSRPHTHSPHSPHSPHYHPQSPHTV
GEGNAANNSVSNSGTTSGSTPDSNNSSYSPASGHCENERTNAPDSQETSTDMKSSSV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccatcgaattataagcaagtatcaatggctacatcaaacgttgttgcatcc
aatcagcgtctcagagcatctggtggaagtagtagtagttcaaatactagtaaggataca
caaagtccttttatacaaactcctcatagtcatccaggatttactcctcaaaaagtagga
aaaaatacaaatgcagattctcggatgccaaaaccaccaaaaccgcctgaaaaacctctc
atgccatatatgaggtacagtcggaaagtatgggatcaagtaaaagctcaaaatcctgaa
ttgaaactttgggaaataggaaaaattattggtcaaatgtggagagatttaccagaagaa
gataaaacagaatttattgaggaatacgaagcagaaaaggtagaatatgaaaaaagctta
aagacttatcataattctccagcatatttggcttatattgctgctaaaaatagaggaaaa
tcagcattatgtgcagcccaacaaaataatgatgatcgagaaagtcatgaacgttcatct
ggtagtagtaaaaatcaagctgcgcaagatagaaggattgatattttacctgcagaagat
gacgatgatcaagatgatggatattccgtaaaacatgtggcatattcacgttatacaaga
aatcatcgtcttattaacgagattttcagtgataccgttgttcctgatgttcgttctgta
gttacaactcaaagaatgcaagtcttacgccgtcaagtacaatctttaactatgcatcag
aaaaaattggaagcagaattacaacaaatagaagaaaaatttgaagcaaaaaaaaggaaa
tttattgaaacaagtgaagtatttcaagaagaattgaaaaaacactgtaggccagcagta
gatgaagaaacatttaataaaatggtagaacgacaatatgaagtacttagaagagagaga
ttaagaggttcggaagaaaatcgatctgatggtcctgcatcaaatgaatctacaccaaat
tctacacctactccaacaccagcttcactcaatgatgaacctacatctgaagctacggaa
aatgaaacgattgataaaaagaccaatggtttcgagaaacccaataatgaaataaagaaa
gaaaattcatcgcctccatatgttgacacaaaaacagaatcccctactgtacaaggaaat
cagccgataaatcaacatggatctaattctaatatgtattgtgtatctgttagtccaatt
caacaacagcaaccaccacaaccgcagcaacaacaaccaacaccgtcctcatcgatgtca
ttaataccaccacaacagcaacaaccgacgccattgccatcaatgtcactgatatcacca
caacagcaacagcagcaacatcatcaacaacagcatcatcaacaacagcaacaaccacat
caacagccacctgttcaatctcatcaacaatcgccaccacaatcacatcaacaaccaaca
cctcaaacacatcaacagccatctcaaacccatccacagccaccgcttcaaactcatcaa
cagccaaaccctcaacctcatcaacaaccatcttcgcagcctccacagctaccatcaccc
caatctcatcaacatcctccgcctcaaactcatcagcaaccaccaccacaatcccatcaa
caaccaccaccacctccatctcatcaacaaccaccgcctcagcctcagccacattcacaa
ccaccacctccaactcatcagccacaactgcctcaaccacatcaacaaccatcatctcaa
actcatcaacagccaccaccaccaccccaatctcatccacaaccaccacctcaaactcat
caatcaccaacacctcaatctcatcaacaaccaccttcacaaccacagcagcaaccaaca
ccccaacctcatcaacaaccaccgccgcaacctcatcagcaaccacctcctcaaagtcat
caacaaccacctcctcaaagtcatcagcaaccacctcctcaaactcatcaacagccacaa
cctcaaccccatcagcagccaccaccaccaccaccaccacctcaatctcatcagcagcca
ccacctcaatttcatccacaaccatcacctcaaactcatcaaccaccgccgccgactcaa
ccacatcaacaaccgccacctcaatctcatcaacaaccgccacctcaatctcatcaacaa
ccgccacctccatctcatcaaccaccacctcaaccccatcaattaccacctcagtcccat
cagcaaccttcaccgcaaccttctcatcaacctccacctcagtctcaccaacaatcgcaa
tctcaatctcatcaacaaacagcacctccaacatcgtcgcagcaacaacaatctaattct
actactaattctgctgtacctgtgactgtaagcgctactcaaaacataccaaatatgcct
ccagtatcttcgcctgcacctccattgcacaatcctcatcaacaagggatgctttcaaac
cattctatgtcaccgcatcaaacatctcaaggaacgcaaggaacacaggttcttcctcaa
ggaccagtaaataatccacatacatcgcctataataccacctaatcaaggatatggccag
caatatcaaccaggacctggttcacagccgcaaaatgttccactcgccccaagacctcca
catccttcttatacttattcgcaacagcaaccttatcatcaaccttacccccaatatgct
catccctattatcatcaaccatattctcaatattcgccgcacactatgagccgtcctcat
acacacagtccacatagtccacatagcccacattatcacccacaatcccctcatactgta
ggagaaggtaatgcagctaataatagtgtatccaattcaggtactacttctggttctact
cccgatagtaataattcatcttattctccagcatcaggtcattgtgaaaatgaacgtact
aatgctcctgacagtcaggagacttctactgacatgaaatcaagctctgtgtaa
DBGET
integrated database retrieval system
