Polistes canadensis: 106787394
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Entry
106787394 CDS
T05611
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcf
Polistes canadensis
Pathway
pcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106787394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106787394
03036 Chromosome and associated proteins [BR:
pcf03036
]
106787394
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106787394
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106787394
PBAF complex
106787394
GBAF(ncBAF) complex
106787394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
106787394
NCBI-ProteinID:
XP_014605203
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MLALGPKKDGGPNAKFFESAEILAQLDGVKQWLLKNCKKYVQTDPPTNKSLATLVVQLLQ
FQEDNLGKNVTKPPMTRVPMKCFLDFKPGGGLCHILSTAYRFKQEQGWRRFDFPVGKSGS
RMDRIVEMLMAAERALTQNRCLTIPSVFVRADVDKPTATKVKEAVRRHQGTVVENEADAT
HIIFPSVDPMEEECARPCMRRERSVLLHWYYFPDSYDSWTTLDLPWEFPEGTLNITSTRS
VYKVSATWALDLDLYNEWMNEEDYEVDDSGQKKVHKYRLLVEDLMAQPAHPPSGKKPKRK
RSPSPLPKLGKRKSSRAPSNLQSTSSTSSAATPKKSRGTGDEEEDLTQGMEDPPAEPRIV
EVVAAPANPPITGQNSNATTSSSLASTGNKKQDNELQPLKSGNMADLDEPIEAGDKGSSQ
GTQDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFF
NGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLI
NYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKSTAI
LGTEEKVSANAMSNFGLKVDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDW
NKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAF
LASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQSG
IAGTGSPEPPDDTTTPSTTGTQASSVTSPHSTGPASIEAKKEDQEKSKDASDVEQSPLEI
TKKEDDSKESEDDTKSSVDAEAIEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVE
ERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLR
AAEFRARQQAHQRLAQEQQQHTPPEQT
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgttaggcccaaaaaaggatggaggaccgaatgccaaattttttgaatctgcg
gaaatcctcgcacaacttgacggtgttaaacaatggcttttaaaaaattgtaaaaagtat
gtacaaacagatcctccgacaaataaaagtttagcaacattagtcgtacaattgctgcag
ttccaagaggataatttaggaaaaaatgtaaccaaaccacccatgacaagggtaccgatg
aaatgtttcttagactttaaacctggaggtggtttgtgtcatatactttctaccgcttat
cgatttaagcaagaacaaggatggcgtaggtttgactttccagttggaaagtcaggctct
cgtatggatcgcatagtagaaatgttaatggcagcagagcgtgctttaactcagaataga
tgtttgactatacctagcgtctttgtaagagccgacgtcgataaaccaacggcaacaaaa
gtaaaagaagcagtaagacgacatcaaggcacagttgttgagaatgaagcagatgctaca
catattatttttccatcagtagatccaatggaagaagaatgcgctagaccatgtatgaga
cgtgaaagatcggttcttcttcattggtattacttcccagatagttatgactcttggact
actctagatcttccttgggaatttcctgaaggaactcttaatattacaagtacaagatca
gtgtataaggtttccgcgacgtgggcgctcgatttagatttatataatgaatggatgaat
gaagaagattatgaggtagatgatagcggacaaaagaaagttcacaaatatagactttta
gtagaagatttaatggcccaacctgctcatccaccatcaggaaaaaaacccaaaagaaaa
agatccccaagtccactaccaaaacttggaaaacgcaaaagtagcagggctccatcaaat
ttacaaagcacttcatcgacttcttcggcagctactccaaagaaatcccgaggtactgga
gatgaggaagaagatcttacccaagggatggaggatccaccagctgaacctcgcatcgtc
gaagttgttgccgctcctgctaatccgccaataacaggccaaaacagtaatgcgacgaca
agcagtagtttggcatcaactggaaataaaaaacaggataatgaactgcaacctcttaaa
tctgggaatatggcagatttggatgagccgatagaagcaggcgacaaaggtagctctcag
ggaactcaagacagagaggaaagagatacgagcaaagaaagaggagaaggaggtaaagga
gacgagccagaagataatgttacagaacaaactcatcatatagttgtaccaagttattca
gcctggttcgactacaattcaattcatactatagagaaaagagcattatctgaattcttc
aatgggaaaaacaaatctaaaacacctgaaatttatcttgcgtacaggaattttatgata
gatacctatagattaaatcctacagaatatattacatcaacagcttgcaggcgtaattta
gctggagatgtttgtgcaattatgcgtgttcatgcttttctggaacaatggggtttaatt
aattatcaagtagatgcagaatctagacctacacctatgggtccaccaccaacatctcat
tttcacgtattatcggatactccatcaggtcttgcaccggttaatccaaatccaccaaaa
acaccgcaaccatctgcagcaaaaacattgcttgatcttgagaagaaatctactgctata
cttggaacagaagaaaaagtttcagctaatgctatgtcaaactttggtttaaaagttgat
cagtattctaggaaacctgcagtgttaaagaacaaacaagcagctggagcaacacgtgac
tggactgaacaagaaacacttttattattggaaggcctagaacttcataaagatgattgg
aataaagtctgcgaacatgtcggttcaagaacacaagatgaatgcatattacatttctta
cggttacctatagaagacccgtatcttgaggaaggtggtccagaaggcttaggacctcta
gcgtatcaaccagtacctttttcaaaggctggaaatccagttatgagtacagtagccttt
ttagcttcagtcgtagatcctagagtggcagctagtgcagctaaagctgctatggaagaa
tttgctgctattaaggatcaagtaccagcagcgttattggatcagcatttacgaaatgtt
caagctagtgctaactcggatggaaaatttgatccagctgctggacttgcacaatcaggc
attgctggtacaggatcacctgaaccacctgatgatactacaacaccgtcaactactgga
actcaagcatcatctgtaacttctcctcattcgacaggtccagcttctatagaagcaaag
aaagaagatcaagagaaatcgaaggatgcatcggacgttgaacaatcaccattagagata
actaagaaagaagatgattctaaagaaagcgaagatgatactaaatcttctgtcgatgct
gaagctattgaggcaaaagaaaaaaaggataaggttgtgagggacgcccaattacaatcc
gcagcagcggccgcattggctgccgctgccgttaaagcgaaacatttagcggctgtagaa
gaacggaaaataaaatcgttagtcgcgttactggtcgaaactcagatgaaaaagttagaa
ataaagttacgtcattttgaggaattagaaacaacgatggaacgcgaacgcgagggactt
gaatatcaaaggcagcaacttattactgaaagacaacaatttcatttagaacaactaaga
gcggctgaattcagagcacgacaacaagcacatcaacgtttagctcaagaacaacaacag
catacacctccggagcaaacataa
DBGET
integrated database retrieval system
