Polistes canadensis: 106787902
Help
Entry
106787902 CDS
T05611
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pcf
Polistes canadensis
Pathway
pcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106787902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106787902
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106787902
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106787902
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106787902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_12
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
106787902
NCBI-ProteinID:
XP_014606145
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MKHILCVHNINTAFSLIIEINRFKMEFIVASVDNMRFDIEIALDEQYGALSLPFAGMDKS
IAAVCQFYPRGTCLKGVSCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPEC
YFYSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFC
PEGPNCKFMHPRFELPAVQDMQPKEGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQ
EMEGNSHNPHHHINMHNGPPQRGPQKPLEEVTCYKCGQKGHYANKCPKGHLAFLSHASGT
NSTSGNQNQNYRR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatattttatgtgtacataatataaatactgcatttagtttaattatagaaatt
aatcgttttaaaatggaatttattgtagcaagtgtagataatatgagattcgatattgaa
attgcacttgacgaacaatatggagcattatctttaccgtttgctggaatggataaatca
atagcagcagtatgtcaattttatccaagagggacatgtttaaaaggagtttcttgtccc
ttcagacatgtaaggggtgatcgtaccatagtatgtaaacattggttaagaggtttatgt
aaaaagggtgatcagtgtgaatttctacatgaatatgacatgaccaaaatgccagaatgt
tatttctattccagatttaatgcatgtcacaataaggagtgtccatttctacacatcgat
ccagaaactaaggttcgtgattgtccatggtatgatcgtggattttgcagacacggtcca
ttgtgtagacatcggcatgtaagacgcgttctttgtatggcctatctcgcaggattttgt
cccgaaggtccaaattgtaaattcatgcacccaagatttgaattaccagcagtgcaagat
atgcaaccaaaggaaggaaagaaagttatgataacttgtcacttttgtggtgagggtggt
cacaaagcaatttattgcaataaaatgccacccgatgtaagagaagcacaagtgaggcaa
gagatggaaggtaactcacacaatccacatcatcatattaatatgcacaatggtccaccc
caaagaggtcctcaaaaaccattggaagaagttacttgttataagtgtggtcaaaagggt
cattatgcaaataaatgccccaaaggacacttggcattcttgagtcacgctagtgggact
aatagcacaagcggtaatcaaaatcaaaattatcgcagataa
DBGET
integrated database retrieval system
