Polistes canadensis: 106787919
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Entry
106787919 CDS
T05611
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
pcf
Polistes canadensis
Pathway
pcf03013
Nucleocytoplasmic transport
pcf03015
mRNA surveillance pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106787919
09122 Translation
03013 Nucleocytoplasmic transport
106787919
03015 mRNA surveillance pathway
106787919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106787919
03041 Spliceosome [BR:
pcf03041
]
106787919
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106787919
TREX complex
106787919
Spliceosome [BR:
pcf03041
]
Complex C
Other components
EJC/TREX
106787919
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106787919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
BspA_v
RRM_occluded
Btz
Motif
Other DBs
NCBI-GeneID:
106787919
NCBI-ProteinID:
XP_014606184
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MVFIPNFPCVLVSSSFAAIITKSLEMVDKIEMSLDDIIKQNKGTRARGGGGRRGRGVGGS
PRRGARRTQRVGGGGGVMRGRSRGGITRTSLPYTRGDVNSAWKHDMFDGVKKVGRGAIGS
TGVTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKA
MKQYNGVPLDGREMNIQVATSEIPVPSVRGGSRLSGNSYVQRTQSRFRGNRGSGPVRGRG
ARRGGRGGSRQATKTPTAAELDAELEAYVKEVK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatacccaacttcccgtgcgtgcttgtatcgtcttcgttcgccgccattatt
acaaagtcgttggagatggtagacaaaatagaaatgagtctcgacgatattatcaaacaa
aataaaggaacgcgagcgcgaggagggggtggtagaagaggtagaggtgttggtggctcg
cctcgtagaggagctcgaagaacccaaagagttggcggtggcggcggcgtcatgcgagga
cgcagtcgtggtggcatcacaagaacttctcttccatacacaagaggtgacgtaaatagt
gcatggaaacatgacatgtttgatggagtaaaaaaggttggcagaggtgcaataggcagc
acaggtgttaccaagttactcgtatctaatcttgattttggggtatcggattcggatatt
caggaattgttcagcgaatttggacctcttaaatcagcagctgtacattacgatagatca
ggtcggtcattaggctccgctgatgttatatttgaaagaagagcagatgctatcaaagca
atgaaacaatataatggagtaccactcgatggtcgcgagatgaacatacaagttgccaca
tccgaaataccagttccgtcggtgcgtggtggctcaagacttagcggtaacagttatgtg
caaagaactcaatctcgttttagaggtaatcgtggttcgggacctgtaagaggtcgcggc
gcaagacgcggaggtagaggaggaagtcggcaagcaacaaaaactcctactgctgcagaa
ttagatgcagaattggaggcttacgttaaggaagtaaagtaa
DBGET
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