Polistes canadensis: 106788064
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Entry
106788064 CDS
T05611
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106788064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106788064
Enzymes [BR:
pcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106788064
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106788064
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106788064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Yip1
Motif
Other DBs
NCBI-GeneID:
106788064
NCBI-ProteinID:
XP_014606471
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSGYTGQDNFWAQPDTQNPYKSELRYFEPPNPQSEFHTYTTEELSSQYNVYSPKSYLDPT
QGSYAGEMFSQDDFTKGDHGFGEDEVEPPLLEELGIDPDRIIQKTLAVLNPFHRRGQIDD
ANYLLQDSDLAGPVTFCLALAAFLLLAGSKAHFGYVYGLATISCLMMYILLTLMSSTNNI
TLLSVASVLGYCLLPVVVLSAFSIFTTLRGTIGLVFAALAVAWATLSASRLLSTMSGENN
QRPLIAYPCFLLYGVPSDPAQVQQPILVCTAHIHWDPEFCDVKLIQTMMLSNELRSILDQ
AGQSFRPGHKPDSSNVQLLLCGDFNSLPDSGVIEFLTSGRVAADHRDFKELAYKSCLQKI
SGCDKPNEFTHSFKLASAYSEDIMPYTNYTFDFKGIIDYIFYSKQSMVPLGLLGPLSADW
FREHKVVGCPHPHVPSDHFPLLVELEMTPTVGTSNGLISRR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttacactggacaagacaatttttgggctcagccggacactcagaatccttat
aaatccgagttacgttatttcgaaccacctaacccacaatcagagtttcatacttatacc
acagaagaattatcatctcaatacaatgtttattcgcctaaaagttatttagatccaacg
cagggctcttatgctggtgaaatgttttcgcaagatgattttaccaaaggtgaccacggt
tttggagaagatgaagtagaaccaccgttgttagaagaacttggtattgaccctgatcgg
attatacaaaagacattggccgtattaaatccgtttcataggagaggacaaattgatgat
gctaattatcttcttcaagattctgatttggctggaccggttacattttgtttagctctt
gctgcattccttcttttagccggttccaaagctcattttggttacgtttatggtctagca
acaatctcatgtttaatgatgtacattcttctaacattaatgagtagtactaataatatt
actttattatctgtggcatctgtattaggatattgtttattacctgttgtagtactttca
gcgtttagtatttttactactcttcgtggtacaatcggtttagttttcgcagctttggct
gtggcttgggcaactttatctgcttctcgacttttgtctaccatgtctggagaaaataat
cagcgtcctcttatagcatatccttgctttcttctttatggagtgccatcagatcctgca
caagtacaacagcccattttagtttgcacagcccacattcattgggatcctgaattttgt
gatgttaaattgatacaaactatgatgttaagcaatgaattacgttccattttggaccaa
gctggccagtctttccgacctggtcataagcctgattcttccaacgtgcagcttttactt
tgtggcgattttaattccctacctgattcaggtgtcattgaatttcttacatccggacgc
gttgcagctgatcatcgcgattttaaggaattagcttataaatcatgcttacaaaagatc
tctggttgcgataaaccaaatgaatttacacattcttttaaacttgcatctgcctacagt
gaagacattatgccttacactaattacacgtttgatttcaaaggcataatagattacatt
ttctattctaaacaaagtatggtacctttaggactgctaggaccgttgagtgcagattgg
tttagagaacataaagtggtaggttgtcctcatccgcatgtaccatccgaccactttcca
ttgttagtagaactagaaatgacaccaacagtaggaacaagcaacggtttgatctcacgc
aggtag
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integrated database retrieval system
