Polistes canadensis: 106788326
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Entry
106788326 CDS
T05611
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pcf
Polistes canadensis
Pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106788326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106788326
03041 Spliceosome [BR:
pcf03041
]
106788326
03036 Chromosome and associated proteins [BR:
pcf03036
]
106788326
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106788326
Spliceosome [BR:
pcf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106788326
Complex B
106788326
Complex C
U2 SnRNP specific factors
106788326
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106788326
TFTC complex
106788326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
106788326
NCBI-ProteinID:
XP_014606981
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MFLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVIGSDSGRIVILEYISAKNIFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLFISCGRGPRSTFRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGVKETDNSEDAAPQQ
QFSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRS
WLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSF
PLEYTPRKFAIHVNSAHIAIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELA
EAFLSEEPNETVFGAPRAGPGLWASLVRIIAPTSGHTFEVHRLEQNLAALCLGLVKFSNQ
GDQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNADCKSVELLHKTVLDEVPLAICPYQGRV
LVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAVGQRIYVSDVQESVYAVRYKRQEN
QLIVFADDTHPRWITATCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDR
GLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLNGTVGVLVPFTSHEDHD
FFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPSKQKSIAGDLER
TPSEVSKKLEDIRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacttaacattacaacgtgctacaggcattacacatgccgtgcatggt
aacttttctggaagcaaaatgcaagaaatcctcgtttcacgtggaaagtccttagaactt
ttaagaccagatcctaacactggaaaagttcatacattactaactgttgaagtttttgga
attataagatcattaatggcctttagacttacaggcggaacaaaagattatatagttata
ggttctgattcaggacgcatcgttattttagaatatatttctgctaaaaatatttttgag
aaagtacatcaagaaacatttggcaaaagtggttgtagacgaattgttcctggacaatat
ttagcgatagatccaaaaggcagagctgttatgataggtgccattgaaaaacaaaagctt
gtatatattttaaacagagatcccgaagcccgtctcactatttcttctcctttagaagca
cataaaagtaatacattggtatatcatacagttggtgtagatgttggttttgaaaatcct
atgtttgcttgtttagaaattgattatgaggaagcagacagtgatcctacaggagatgca
gctgttaaaacacaacaaacattaactttatatgaacttgatcttggactaaatcatgtt
gttcgtaaatatagtgaaccattagaagaacatgctaattttttagtgtctgtcccaggt
ggtaatgatggtcccagtggtgtacttatttgttctgagaattatttaacttataagaat
ttaggtgatcagcatgatattcgttgtcctataccaagaagaagaaatgatctcgatgat
ccagaaagaggcatgatatttgtatgttctgcgacacataaaacaaaaagtatgttcttc
tttttggcacaaactgaacaaggagatatctttaaaattactttagaaactgatgaagat
atggttactgaaataaaattaaaatattttgatactgtacctgtagcaacaagcatgtgc
gtattaaaaacaggattcttatttgttgcatctgaatttggaaatcattatctttatcaa
attgctcatcttggagatgacgatgatgaaccagaatttagttctgcaatgcctttagaa
gaaggagatacatttttctttgcacccagaccacttcgtaatctagtattagttgatgaa
atggatagtttatcacctattatggcttgccaggttgctgatttagctaatgaagacact
ccacaattgttcatatcatgtggcagaggaccgcgatctacttttcgtgtattacgtcat
ggtttggaagtatcagaaatggcagtcagtgaacttcctggcaatccaaacgcagtgtgg
actgttaaaagaagagttgatgaggaatatgatgcatacatcatagtgtccttcgtgaat
gctactcttgtgcttagtatcggagaaactgttgaagaagtgacagattctggctttctt
ggcactactcctacgctcagttgttctgctttgggagaagatgctttagtacaggtatat
ccagatggtattcgtcatattagagccgacaaacgcgtcaatgaatggaaggcaccgggt
aagaaaacgattgtgaaatgtgcagtaaatcagcgccaagtggtaatagctcttactggt
ggagaattggtctactttgaaatggatcctactgggcaacttaatgaatatacagaaaga
aagaagatgccatcagaagtgatgtgtatggcgcttggaaatgtggctgttggagagcaa
cgttcatggtttttagctgttggtcttcaagacaatactgtaagaattatttcattggat
ccatcagattgtttagcacctagaagtatgcaagctctacctgcagcagctgaaagttta
tgtatcgtagaaatgggtgttaaagaaactgataattctgaagatgcagcaccgcaacaa
caattcagcctttatttaaatataggtttgcaaaatggtgttttattaaggaccgtatta
gatcctatttctggagatcttgcggatacgcgtactcgatatttaggatcacgacctgtg
aaactatttagaattaaaatgcagggtaatcaggccgtgttagctatgagtagcaggtca
tggcttagctattattatcaaaatcgttttcatttgacgcctttatcttacgaaagctta
gaatttgcctctggcttcagttctgaacaatgtccagagggtatcgttgctatatcaaca
aatacacttagaattttggctctagaaaaattaggagcagtattcaatcaagtcagtttt
ccattagaatatactccaaggaaatttgctattcatgtcaattctgcgcatatagcaatc
atagagactgaacataatgcatacacagaagaaactaaacagcaaagaaggttacaaatg
gcagaagaaatgcaagaagcagcaggtgccgaggaagctgcagttgccagagaattggca
gaagcatttctatcggaagaacctaatgaaactgtttttggtgcaccaagagctggacct
ggtctttgggcatcgcttgtaagaattatagcacctacatctggacataccttcgaagtg
catagattagaacaaaatctggctgcattatgtttaggtttggttaaatttagtaatcaa
ggtgatcagttgttcctcatagtcggtgttgcaaaagaatttcaacttaatccaagagtc
agcaatggaggctttctttatacttacaaagttaatgcggattgtaaaagcgtcgagtta
ctacataagactgtcttggatgaagttccattagcaatttgtccatatcaaggtcgagtg
ttggttggtgtcggcagaatgctacgcctttatgacatgggtaaaaagaaattattacgc
aaatgtgaaaataagcacattccaaatgctgttgtttccatcaatgctgtcgggcaacgc
atatatgttagtgacgtacaagaatcagtttatgctgttagatataagcggcaagaaaat
caattaattgtttttgctgatgatacacacccaaggtggattacagcaacttgtgtacta
gattatgatactgtggctactgctgataagtttggaaacattgcagtgatacgacttgct
agtggcattaacgatgatgttgatgaggatcctactggtaataaagcactatgggacaga
ggtttattaaatggtgccagtcaaaaagctgatactgtcgcgtgtttccatgttggtgaa
actgttatgtctttgcaaaaagctactcttattcctggtggatctgaaagtttagtttac
acaacattgaatggcacagtaggagtacttgttccttttaccagtcatgaagatcatgat
ttctttcaacatctcgagatgcacatgcgttcggaacatccaccgctttgtggaagagat
catctttctttcagatcgtattattatcctgtgaaaaatgttatagacggtgatctttgt
gaacaattcaactcgattgaaccttcgaaacagaaaagtattgcgggtgatcttgaaaga
acaccgtccgaggtgtcaaaaaaattagaggatatacgtacacgttacgctttctag
DBGET
integrated database retrieval system
