Polistes canadensis: 106788488
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Entry
106788488 CDS
T05611
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcf
Polistes canadensis
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcf03016
]
106788488
Enzymes [BR:
pcf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106788488
Transfer RNA biogenesis [BR:
pcf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106788488
Prokaryotic type
106788488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
106788488
NCBI-ProteinID:
XP_014607264
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MLHCIKNRVVSSYNVFRQITCILGPNNYKNMSIQIDPEPNLDNQNRKRIRADENEDTDTK
IQKVESLKIKKRPYALMMGYLGRDYYGMQVNPGMKTIENDLLSALLKNNLITMENIENLR
SFNFQRAARTDKGVSAARQVVSLKLPETVNKDSINDCLPNEIRVFGIKRVTKGFNSKINC
CGRTYRYILPTFAFAPEDMASLPSREECDIEKRIEELSVINGKPYTDFRLSSETLGKINS
FMQLFQGTHNFHNFTSKVKPLDPRAKRYIIKFKCIETFVTENIEFAIIEIKGQSFMLHQI
RKMISMVIAYLRNMATEDSLQQAFKDEKMDIPLVPGLGLSLNYVHYDHYNKRYGSDGIHE
TLDWKECEEEVEQFQAEYIVKHIVNTEIVEKTMLNWLASLPLHSFSIRDEESIAL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttgcattgcataaagaatcgtgtagttagtagttacaacgtgtttcgacagataacc
tgcattttaggtccaaataattataaaaatatgtcgattcaaatcgaccctgaaccaaat
ttagataatcaaaatagaaagaggataagagcagatgaaaatgaagatacggatacaaaa
attcaaaaagtagaatcattaaagattaaaaaaaggccttacgctttgatgatgggctat
ctcggtagagattattatggcatgcaagttaatcctggcatgaaaactatagaaaatgat
ttattaagtgcattgttgaaaaataacttgattactatggaaaatattgaaaatttaaga
tcatttaattttcaaagagcggcacggacagacaagggagtatctgctgctagacaagta
gtttcactcaaactaccggaaaccgtcaacaaagatagcataaatgattgcttaccaaat
gaaataagagtgtttggtatcaaacgcgttaccaaaggtttcaatagtaaaataaattgt
tgtggtagaacatatagatatattctacctacttttgcatttgcaccagaagatatggct
tcattaccatccagggaggaatgtgacattgaaaagcgaatagaggagttatcagtcatc
aatggaaaaccatatactgattttagattaagttcagaaacattgggaaaaatcaattcg
tttatgcaactttttcaaggaactcataactttcataatttcacatctaaagtaaagcca
ttggatccacgggcaaaacgttacatcattaaatttaaatgcatagaaacatttgtaaca
gaaaatatagaatttgctattatagaaataaaagggcaaagttttatgttgcatcaaata
agaaaaatgatttctatggttatcgcgtatttaagaaatatggcaacagaagattctttg
caacaagcatttaaagacgagaaaatggatataccattagttccaggtttaggtttatct
ttaaattatgtacattacgatcattataataagagatatggatcggatggcatacacgaa
actttagattggaaggaatgcgaagaggaagtagaacaatttcaagcggaatatatagtg
aaacacattgtaaatacagaaatagtagaaaagacaatgttaaactggctggctagtctt
cccttgcattcattttcaatcagggatgaagaatctatagcattataa
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